Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03834 ATGGACCCTGTGGAGGTTCTCCCTCCCTGGGTTTCCGAAGACGACCTTCTCCTCAAGAATGCTGTCGAGGCTGGTGCTTCCTTGGAATCCCTGGCCAGAGGAGCAGTTCGGTTCTCAAGGCGGTACTCCTTTAGGGAATTGCAAGATCGGTGGCTGTCTCTGCTTTACGACGGAGATGTTTCCACGGAGGCTGCTATTGCCATGAGGAAATTGGAGCTGGCTAAGTCAGCCGCTGTAACCCTTGGCGAAGGAGTTGGTGGTGGGGAGAAGAAGAAATTTCAAAACAGTGGTGGTGTTGGAGAAAAGAGAAAATTTCAAAGCATTCGCGACCGGTACTACACCATGCAGAAAAAGTTGCGCCGGCACCGGATTAGCATCATGTCTTCCAAGGTAAAGAATGGGGTGGTGGGGTGTGAGGGAAAAGAGAATGTGATGGTTGATGGTAATTTAAAAAGTGATGTTGTGAATAGTAGTATAGTTGATTATGGGAATTGTTTGGGGTTAGAGGGGGCAGAGGTAGGACAATTGAATGATTTGGTGAGTGATGAACCTATGTGGAAAACTATTGAGGATGTTTGTTTGCCTGATAGCGGTGAGGGTAAAAGTGATGGTTCTGAAGGGAGATTGGATTTGAAAGAGGAGTGTTTGAATGATGGATTGAAATTAAATGTCCCTGATGCTGAATGTCTCCTGAACTTGACAAATGAGGATGAGCTTATCCTAACGGATGTAGATGGAAAGGAGGAGGTAAGGGCTGTGGATAAAGATAATAAGGACAAGGATAAGTCATGTCACAATAATGTTGATTCAATTCTGTTTAGTTCTCCTGGTGATGTTAGTGAATTGCAGAAGTTGGATGTGGAAGCAAAACTTGCTGTGCCTAGTGGATGTGCTTCTGATGGGCTGGGGGTTGCTGCTAATCAATTCGTTGGCAGTTCTGGTGATCAGCATTTTGTTTCTGATTCTGGAAACAATGATGCACTGTCAGCTGCAGCACAAAGTCCTCACCCTGAACACAATGAGGGATTTATGATCTGTGTATTGAATACCGAGGACCCTGATATCCCATGCAATCTTAACACGGATGTATCCATTGTAGTTTCTGAATTGGAAGCTCTGAAATCCCAACCAATTGTTAAAGAGGTGGGTTATTCAGAATCTGCTATTGGTATTCAAAGAAGAAATGAACCAGATGGAAGCCTGAAGAAAGAAGCCGTCCTTTCTCAGCCTTATTCTGCTTCACAAACATCTCGACAGGGATTGATGCATAATGTGAATTCAAGCTACCGACCTGTTGTTCTTGGACTGAAATGTGAAAATCCTGGAAGAAACTCAATATCTTCAGTTTCTAGACAGAATAGAAATCTCAATGTCAACTCAAGTCATGGCAGATCAGTTCGTGCAACTGTGATGCCTGCCTTAGATAGACATCTAAAACAAGAGGATATGGACGGTCCAGCTGTTGCACGTGTTAAGGCCCAGGAGCATAAAGCTTTGTCAAAATCAGAAAAAGAAACAAAATCATTATCTCTTGATCAAGAAGGAGGTAATATTGAAGATGATGACAACTATAACAATTATGATGATGATTATAATGATGACGAACTTCCTCAATTTTCTGATGTTGAGACAATGATTCTTGAAATGGATTTGTCTCCAATGGATCAAGACGCAAATGCAAGGAGAGAAGTCTTGAGATATCAACATGAAGAAAGTAGGAGGACCATCATGAGATTGGAGCAAGCTGCTCATTCCTCTATGGGAAGAGCCATTAGATCTCAGGGTGCATTTGCAGTAGTATATGGGCGCATTCTGAAGGAATATATTAGAAAAAGCATGGTTATACTTGGCAGAGCAACAAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGCGACTACGAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGAAGTAGATGGTTCTTTCATTATTAAAAATCTTGGCAAGAGATCTATCTTCTTGAATGGCAAAGAAATTGCTTCAGGACAAGCGCGGGGTCTTGGTGCTTGTAGTGTGATCGAGGTAACTGTCTTTCCTTTCTATTTTGAACAACTTTTACATAGTAATACTGCAACTTTGTTCTTTACCTTTGGAACATAA 2139 0.4212 MDPVEVLPPWVSEDDLLLKNAVEAGASLESLARGAVRFSRRYSFRELQDRWLSLLYDGDVSTEAAIAMRKLELAKSAAVTLGEGVGGGEKKKFQNSGGVGEKRKFQSIRDRYYTMQKKLRRHRISIMSSKVKNGVVGCEGKENVMVDGNLKSDVVNSSIVDYGNCLGLEGAEVGQLNDLVSDEPMWKTIEDVCLPDSGEGKSDGSEGRLDLKEECLNDGLKLNVPDAECLLNLTNEDELILTDVDGKEEVRAVDKDNKDKDKSCHNNVDSILFSSPGDVSELQKLDVEAKLAVPSGCASDGLGVAANQFVGSSGDQHFVSDSGNNDALSAAAQSPHPEHNEGFMICVLNTEDPDIPCNLNTDVSIVVSELEALKSQPIVKEVGYSESAIGIQRRNEPDGSLKKEAVLSQPYSASQTSRQGLMHNVNSSYRPVVLGLKCENPGRNSISSVSRQNRNLNVNSSHGRSVRATVMPALDRHLKQEDMDGPAVARVKAQEHKALSKSEKETKSLSLDQEGGNIEDDDNYNNYDDDYNDDELPQFSDVETMILEMDLSPMDQDANARREVLRYQHEESRRTIMRLEQAAHSSMGRAIRSQGAFAVVYGRILKEYIRKSMVILGRATNDVHVDIDLGKEGEEATTKISRRQALIKLEVDGSFIIKNLGKRSIFLNGKEIASGQARGLGACSVIEVTVFPFYFEQLLHSNTATLFFTFGT 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03834 712 MobiDBLite consensus disorder prediction 443 464 - -
Spst3g03834 712 MobiDBLite consensus disorder prediction 479 510 - -
Spst3g03834 712 Pfam N-terminal region of micro-spherule protein 10 77 IPR025999 -
Spst3g03834 712 ProSiteProfiles Forkhead-associated (FHA) domain profile. 614 672 IPR000253 GO:0005515
Spst3g03834 712 SMART FHA_2 613 672 IPR000253 GO:0005515
Spst3g03834 712 PANTHER MICROSPHERULE PROTEIN 1 8 696 IPR037912 GO:0002151|GO:0031011|GO:0071339
Spst3g03834 712 SUPERFAMILY SMAD/FHA domain 607 696 IPR008984 GO:0005515
Spst3g03834 712 MobiDBLite consensus disorder prediction 316 336 - -
Spst3g03834 712 MobiDBLite consensus disorder prediction 316 331 - -
Spst3g03834 712 Gene3D - 554 700 - -
Spst3g03834 712 MobiDBLite consensus disorder prediction 479 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03834 Spst-Chr3 88339240 88343075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03834 - - vra:106769492 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03834 3 88339240 88343075 Spst3g03834 3 88339240 88343075 ECH