Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03833 ATGGTGTCTCTCACACTCTCTTCCCCTCACATTCACCTTTTTCTCATTTTCTCACTTTTCGTAACCTCTTTCGTTACAGAATCAGCCACGCATTGGGGTGACACGCAGGTTCTGAAGGAACTAAAGGACAACCTCGAGCCTGCTTCGGTCACTCCTGGCTCCTGCGTCTACTCATGGGACTTCTCCTTTGACCCCTGCGACAACCTTTTCGGCGACAAGTTCACGTGCGGCTTCAGGTGCGACGCTTTCGTTTCGGGAACAAGTCGACTCACCGAACTCACACTCGACCCCGCTGGTTACACCGGTTCACTCTCCGCCACGTGGAACCTCCCCTACCTTGAAACTCTCGACGTCTCAAACAACTTCTTCTCCGGCCAAATCCCCGACTCACTCTCCAACCTTACTCGGTTAACTCGACTCGGTTTATCGAAAAACTCGCTTACCGGAACTATACCCTCTTCTTTATCCTCCCTCACAAACCTCCAAGAGCTTTACCTCGACAACAATAACCTCCAAGGACCAATTCCCGTTAGCTTTAACGCCCTCACAAACCTTAAACGCCTCGAAATGCAGTCCAACAAGCTAAACGGTGTTGTTCCGAGTTTGAGCTCTCTGAAGAATCTTTTCCACTTGGACCTCAGCTTCAACCTTTTCACCGGAGGGTTACCCTCCGCGTTGCCGGAATCTCTGCTTCAGATTTCAATGCGGAACAACAGCTTAAGCGGCGCGTTGGAACCCGAATCTCTGAGGAACTTGAACTACTTGGAAGTGATGGATTTGAGTGGCAACAGGCTCAGCGGTGCCGTGCCGTTTGCGCTATTCGAACTTCCCTCCTTGCAGCAAGTGACGCTATCTTTCAACGAGTTCTCGCACATGGAAGCGCCTTCTCACGCTTTGGAAATGCGGAGCGGGGTCATAGCGGTTGATCTGAGTAACAATGAGCTTGGGGGGTTTCTGCCGTTGTTCCTGGCATTGATGCCGAATCTTTCGTCATTGTCGTTGGAGAACAACAAGTTCGGGGGAATGATTCCGATCCAGTACGCGTTGAAGACGGCTTTCCCCGAAGCTGGGGTTGCTCCGTTGGAGAGGCTTCTGTTGGGGGGTAATTACTTGTTCGGAGGTATTCCGAGTCCTCTAATGGCGCTTGAACCGGGTTCTGCCAATGTGAGACTTGTCGATAATTGCTTGTATAGGTGTCCTCTTACGTTCTTCTTCTGTCAGGGAGGGGAACAAAAGTCTTTGGAAGAATGTAAGAGATTCAGCCACTTCATTCCCTAG 1278 0.5078 MVSLTLSSPHIHLFLIFSLFVTSFVTESATHWGDTQVLKELKDNLEPASVTPGSCVYSWDFSFDPCDNLFGDKFTCGFRCDAFVSGTSRLTELTLDPAGYTGSLSATWNLPYLETLDVSNNFFSGQIPDSLSNLTRLTRLGLSKNSLTGTIPSSLSSLTNLQELYLDNNNLQGPIPVSFNALTNLKRLEMQSNKLNGVVPSLSSLKNLFHLDLSFNLFTGGLPSALPESLLQISMRNNSLSGALEPESLRNLNYLEVMDLSGNRLSGAVPFALFELPSLQQVTLSFNEFSHMEAPSHALEMRSGVIAVDLSNNELGGFLPLFLALMPNLSSLSLENNKFGGMIPIQYALKTAFPEAGVAPLERLLLGGNYLFGGIPSPLMALEPGSANVRLVDNCLYRCPLTFFFCQGGEQKSLEECKRFSHFIP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03833 425 Gene3D Ribonuclease Inhibitor 300 393 IPR032675 -
Spst3g03833 425 FunFam Nuclear pore complex protein NUP107 33 201 - -
Spst3g03833 425 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Spst3g03833 425 Pfam Leucine rich repeat 111 171 IPR001611 GO:0005515
Spst3g03833 425 Pfam Leucine rich repeat 236 288 IPR001611 GO:0005515
Spst3g03833 425 SMART LRR_typ_2 205 233 IPR003591 -
Spst3g03833 425 SMART LRR_typ_2 110 134 IPR003591 -
Spst3g03833 425 SMART LRR_typ_2 326 351 IPR003591 -
Spst3g03833 425 SMART LRR_typ_2 182 204 IPR003591 -
Spst3g03833 425 SMART LRR_typ_2 276 301 IPR003591 -
Spst3g03833 425 SMART LRR_typ_2 158 181 IPR003591 -
Spst3g03833 425 Gene3D Ribonuclease Inhibitor 200 299 IPR032675 -
Spst3g03833 425 SUPERFAMILY L domain-like 52 404 - -
Spst3g03833 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03833 Spst-Chr3 88317759 88319036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03833 113 382 Receptor kinase-like Gene Family AT4G36180 37.838 3.03e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03833 - - gmx:100787530 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03833 3 88317759 88319036 Spst3g03833 3 88317759 88319036 ECH
Spst3g03833 3 88317759 88319036 Spst3g03833 3 88317759 88319036 PCT