Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03831 ATGATAGCAGTAATGTTTCTTCTCATTTTCTCATCTCTTGCCTCAAATTCGGAGCCATGTCACGTGGTGGACAAAGAAGCATTACTTGAATTCAAGAGCAGGATCATCTCTGACCCTTCAAAACTGCTAGATTCGTGGACACCTTCCTCTGACTGCTGCCACCATTGGGAAGGCATCGCATGTGGTTCCAATGGCAGGGTCATCAGCCTCACTAGAAACGGCGTGGTGTTCGACGTCGATGGCATCCCTCTAGAAACATACATGTCAGGAACATTGTCACCTTATCTTGGAAACTTGTCTAGTTTGCAAGGTTTGGACCTTAGCAATCTGAAGCAGTTGCATGGTCCAATACCTCCAGAACTGGCAAAGTTATCCCACTTGAGGATACTTTTTCTCTATTCAAATAAATTCTCAGGTGGCGTACCGGCATCTTTTGAAAAGCTTTCACGGCTTCAGAGTTTGTACCTCGATAACAACCAATTATTTGGTAATGTTCCTTTTTCTGTCTTCGCCTCCTTCAAGTCTCTTTCAGAACTTGGTCTATCTGGGAACAATCTTTCCGGGGGGATTCCTTCTTCCATTGGAAGCATGGCGTTTCTCACTAGGCTTGACCTTCATCAAAACAATTTTCATGGAAACATTCCTTCTAGCATTGGAAATCTTGTAAACCTCAAGAAATTGGATTTCTCTTATAATCAGATTAGTGGAAGAATCCCGGAGTCAATTGGGAGACTTTCACAATTGATTTTTCTAGATCTCATGCATAATAGTTTCTCAGGAAACCTCCCTTTTTCTATGGGAGATTTAAGTTCTCTAAAGTTTTGCAGTTTATCAGCGAACAAGCTCGTAGGCGTTTTGCCTTATTCCATTGGAAAACTCAGGAATGTGCAAAGGCTAATTCTTGAGAACAATAAACTCAGTGGGAAGTTACCTTCCACTATTGGCCATCTAACTAGTTTAACAGATTTATTTCTTGCAAACAATGAATTCAGTGGCAAAATTCCACCTTCCTTTGGCAATTTAATCAACCTGCAAACATTGGATTTGTCAAGAAACCAACTTTCGGGTCTACTTCCCCCACAACTTGCTAAACTACAGAGTTTGCAAACTTTAGACTTGTCATTCAACCCACTAGGACTTGTCAAAGTACCCAAGTGGATTTCCAAGCTGAGAGTTTTTCAGTTGAAATTGGCCAAGACGGGGATCAAAGGCCAACTTCCAAAGTGGCTTTCATGTTCATCAGTGTCAACCCTTGACTTGTCCAGCAATGCATTAACGGGGAATTTGCCATGGTGGATTGGAAACATGACTCGCCTTTCCTTCCTGAACCTGTCAAATAACGAGTTTCATTCGTCCATCCCATTGGCATTCAAGAATCTTTCTTCACTGATGGACCTTGACCTCCATTCCAATAAGCTCACAGGGTCTATGACAGTGGTGTTTGAGAAAGAAGTTCAATTTTCACTGGGCCATTTCAACTCCGTTGACCTATCTAACAACAAGTTTTGTGGTCCCATTGACGAGAACATTGGAGAGAAGGCCTCAATGAGTTCAATCATATCTCTTGCATTGTCACACAACCCATTGGGAGGATCTATACCAAAGTCAATTGGGAAACTGAGAGAATTGGAGATTCTAGACCTTGAAGACAGTGAACTCTCGGGGAATATACCTGAAGAGCTTGGTGATGCCGAAACGTTAACAAAGATTAATCTTTCAAAGAACAAATTAAGTGGCAACATACCAGAGAAGGTCCTAAATTTGAAGAAGCTTGAAGAGTTCGATGTGTCAAGGAACCAACTCAGAGGGAGGATCCCTCCACATAAGGCCATGTTTCCTATTTCAGCTTTTGTGGGTAATCGTGGACTGTGTGGACCACCACTTCCTCCTTGTAAACTTAGTTATAGATAA 1911 0.4197 MIAVMFLLIFSSLASNSEPCHVVDKEALLEFKSRIISDPSKLLDSWTPSSDCCHHWEGIACGSNGRVISLTRNGVVFDVDGIPLETYMSGTLSPYLGNLSSLQGLDLSNLKQLHGPIPPELAKLSHLRILFLYSNKFSGGVPASFEKLSRLQSLYLDNNQLFGNVPFSVFASFKSLSELGLSGNNLSGGIPSSIGSMAFLTRLDLHQNNFHGNIPSSIGNLVNLKKLDFSYNQISGRIPESIGRLSQLIFLDLMHNSFSGNLPFSMGDLSSLKFCSLSANKLVGVLPYSIGKLRNVQRLILENNKLSGKLPSTIGHLTSLTDLFLANNEFSGKIPPSFGNLINLQTLDLSRNQLSGLLPPQLAKLQSLQTLDLSFNPLGLVKVPKWISKLRVFQLKLAKTGIKGQLPKWLSCSSVSTLDLSSNALTGNLPWWIGNMTRLSFLNLSNNEFHSSIPLAFKNLSSLMDLDLHSNKLTGSMTVVFEKEVQFSLGHFNSVDLSNNKFCGPIDENIGEKASMSSIISLALSHNPLGGSIPKSIGKLRELEILDLEDSELSGNIPEELGDAETLTKINLSKNKLSGNIPEKVLNLKKLEEFDVSRNQLRGRIPPHKAMFPISAFVGNRGLCGPPLPPCKLSYR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03831 636 FunFam Leucine-rich receptor-like protein kinase family protein 262 358 - -
Spst3g03831 636 Gene3D Ribonuclease Inhibitor 314 379 IPR032675 -
Spst3g03831 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Spst3g03831 636 Gene3D Ribonuclease Inhibitor 193 313 IPR032675 -
Spst3g03831 636 SMART LRR_typ_2 124 147 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 173 197 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 221 245 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 460 483 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 365 390 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 436 459 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 588 619 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 317 340 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 540 564 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 148 172 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 341 364 IPR003591 -
Spst3g03831 636 SMART LRR_typ_2 293 316 IPR003591 -
Spst3g03831 636 Pfam Leucine rich repeat 337 378 IPR001611 GO:0005515
Spst3g03831 636 Pfam Leucine rich repeat 200 257 IPR001611 GO:0005515
Spst3g03831 636 Gene3D Ribonuclease Inhibitor 22 192 IPR032675 -
Spst3g03831 636 SUPERFAMILY L domain-like 34 385 - -
Spst3g03831 636 SUPERFAMILY L domain-like 286 607 - -
Spst3g03831 636 PANTHER UNNAMED PRODUCT 5 109 - -
Spst3g03831 636 PRINTS Leucine-rich repeat signature 344 357 - -
Spst3g03831 636 PRINTS Leucine-rich repeat signature 365 378 - -
Spst3g03831 636 ProSiteProfiles Leucine-rich repeat profile. 343 366 IPR001611 GO:0005515
Spst3g03831 636 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 359 634 - -
Spst3g03831 636 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 253 - -
Spst3g03831 636 Gene3D Ribonuclease Inhibitor 380 635 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03831 Spst-Chr3 88310851 88312761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03831 22 634 Receptor kinase-like Gene Family AT4G08850 33.937 4.61e-89 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03831 - - gmx:102664464 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03831 3 88310851 88312761 Spst3g03831 3 88310851 88312761 ECH