Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03824 ATGGCCGCGGTTCGTAAGCGGGTATGGCAGTTATCTGGAATCGGAGCTTTTGGGGCTTCCAAATCCAAAGTGTCGTCATCATTCGAAAGAGCAATATTCCATCCTTTTCCTATTTCGGGGTCAAGACATTTTTCTCAATTGGTGAAATCCAACAGAAAACACTTGTTTCTCGTCGACACCTTAGCCCTCGTTAGGAGACTGGAGGGGGAAGGAGTACCCTCGAAGCAAGCCGAAGCAATAACCGCTGCCATGACCGAAGTTTTAAATGACAGTCTCGAAAATGTGTCTCAGTCGTTAGTAGCTAAAGGAGAAATGCAGAAAACTGAGATGATGCAAGAAGCCAATCTGTCCAAGTTTAAAGCAGAGGTGCAGAGCTCACAGGGACATCATTTTTCTCTCTTACAACATGAGACTGAGAAGCTTAGGAATGATATAGAGAAGATGCGTAGTGAGTTAAGGAATGATATAGAGAAGATGCGTAGTGAGTTAAGGTATGAGATAGATAAAGTCACTGCTGGACAGCGATTAGATTTGAACCTTGAAAGGGGGAGAATAAGGGAGGAATTGGCTGATCAGAGTGCTGAAACTAACAACCTGACAAACAAACTTGATAGAGAGATCCATTCTTTAAGAGCACAACTGGAAGCAGCCAAATATGATGTTATAAAATACTGCATAGGAACACTTGTTTCGATCTCTGCCGTTGGTCTTGCTGTGTTACGCATCTTGATGTAA 735 0.4299 MAAVRKRVWQLSGIGAFGASKSKVSSSFERAIFHPFPISGSRHFSQLVKSNRKHLFLVDTLALVRRLEGEGVPSKQAEAITAAMTEVLNDSLENVSQSLVAKGEMQKTEMMQEANLSKFKAEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIREELADQSAETNNLTNKLDREIHSLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03824 244 FunFam Coiled-coil domain-containing protein 90-like 59 154 - -
Spst3g03824 244 Coils Coil 131 162 - -
Spst3g03824 244 Gene3D - 59 172 - -
Spst3g03824 244 Pfam Coiled-coil domain-containing protein 90-like 151 243 IPR024461 -
Spst3g03824 244 Pfam Coiled-coil domain-containing protein 90-like 58 161 IPR024461 -
Spst3g03824 244 Coils Coil 200 220 - -
Spst3g03824 244 PANTHER UNCHARACTERIZED 35 156 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03824 Spst-Chr3 88218955 88222476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03824 - - gmx:100806915 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03824 3 88218955 88222476 Spst3g03824 3 88218955 88222476 ECH