Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03823 ATGGCGGCACCCACGACGACGGCGCCGTCGCTTTTGTCGCCGACGCAGAGGTACGCCGCCGGCGCATTGTTCGGCCTGGCTCTGCACGAGGCTCAACTCAATCAAACCAACCCGTTACCGTTACCCGTTTTGGAGGACTCCCACTGCGAGGGACGAATCAGTAGTAGCTCCAGCAGCGACTCGGTTTCCGAGGACCCGGATCTTTGGGTCCACCACAGTTCGGGTTTGCTCCGCCCCGTTTTTAAGTTTCTTGAAATTGATTCCGCTGCCTGGTCTGGACTAGAGGAAACCGCTGGTTCTTCTTCAGCTACGCATCACGTGGGACCGTTCTTGAGGTTACTTTCACAAGAATTGGACGATGACTCTTCTCAAACGATAGATCAAGAACTAGCTTTGTCAAGTGCAGTTGATGGTATCACACGTGACATGCTGCAAAACTTAGAGTTTTCCGAGTCTAAAAGGGAGAAGCTTCGCGATTATGAGCATAAATGTCGTGAGAAGTTCTCGATCGATGAAGTTCAGCCTCATGGTGAAAAGTTGGATGAGAACTTGGAAGAACTGCAGGTAATGGAAATTGCTCCTTTAGTTGACTGTAGAGAGCCGCAGCAGGGGTCTGTTGGTTGGAAGATTGACGAGAGACCAATTGAGGAAGTAATGATGCTGAGTGATCAGAGGAAGGTGACAGTTCTGTATGAACTCCTGTCTGGTTGTTTGTCAAATTTAGGTGAAGATATCGGGCGGAGAAGGAAGGGCTATGATGCTCGACATCGTGTGGCTCTGAGGTTGCTCGCAACATGGCTTGATGTCAAGTGGACAAAAATGGAGGCCATTGAGACCATGGTTGCTTGTTCTGCAATGGCTATTATTAAAGCGCAAGAATCAAAAAATGAAGAAACTCAATCAAAAGAAAGCAAGTGGGCTAAGATTAAGCGGGGTGGTATAATTGGTGCTGCTGCAATAACTGGTGGAACTTTGTTGGCTATTACTGGTGGGTTAGCGGCACCGGCCATTGCTGCAGGTCTAGGTGCTTTGGCTCCAACATTGGGTACTCTGATCCCCGTAATTGGAGCAAGTGGATTTGCTGCAGCTGCTAGCGCTGCAGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGACTTACTGGAAGCAAAATGGCTCGAAGAGTTGGGGGAGTTGATGAGTTTGAATTCAAGGCTATTGGAGAAAACCATAACCAAGGCAGGCTAGGGGTTGAGATCTTAATCTCTGGATTTATCTTTGAGAAGGAAGATTTTATAAGGCCATGGGAAGGACGGAATGACAACATGGAGAGGTACAATATTGCCCTTAAATGGTCAAGAACACCTTGGAAGGAACACTTGATGTCGATGTATCATGATGATAGAAAATTACCTGTTCTATTGAAATCAGCTTGTATTTTAGTTCAGTTTATCTTGAAACTGTACTGTTATTATTCTTATGATTGA 1488 0.4698 MAAPTTTAPSLLSPTQRYAAGALFGLALHEAQLNQTNPLPLPVLEDSHCEGRISSSSSSDSVSEDPDLWVHHSSGLLRPVFKFLEIDSAAWSGLEETAGSSSATHHVGPFLRLLSQELDDDSSQTIDQELALSSAVDGITRDMLQNLEFSESKREKLRDYEHKCREKFSIDEVQPHGEKLDENLEELQVMEIAPLVDCREPQQGSVGWKIDERPIEEVMMLSDQRKVTVLYELLSGCLSNLGEDIGRRRKGYDARHRVALRLLATWLDVKWTKMEAIETMVACSAMAIIKAQESKNEETQSKESKWAKIKRGGIIGAAAITGGTLLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGGVDEFEFKAIGENHNQGRLGVEILISGFIFEKEDFIRPWEGRNDNMERYNIALKWSRTPWKEHLMSMYHDDRKLPVLLKSACILVQFILKLYCYYSYD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03823 495 Pfam Protein of unknown function (DUF726) 308 452 IPR007941 -
Spst3g03823 495 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 5 453 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03823 Spst-Chr3 88211589 88214913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03823 - - gmx:100777689 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03823 3 88211589 88214913 Spst3g03823 3 88211589 88214913 ECH
Spst3g03823 3 88211589 88214913 Spst3g03823 3 88211589 88214913 PCT