Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03807 ATGGTTATTTATGAACCTGGTGGCAAAGCCCAACAATTGGCAGCCTTTGGATTTCATCTATATCTCTTCGGTTTCATGAGAAAGTTAACTGAAAAGGGAGGAGCTATGGCTGCCGTGCTAAATCAAAAGCGCGTAACAAAACGACATATTGGTGGAGGGTGGCTGTCTCGTTGGGCCGTTCGCACGTTCACCTCCCTAAAACGACAACCGAAACTCGTTCCGAGGGCACTTGGTAGCATTTTAGCGGAGACAAGCGCCACGCCTGGGCGAGTGTGCGAAATGGCAGTTTCAGAGAGGAATCATAACCATTCTCATTATCATCAACTTTTCTCAATGTTAATCGTCCTATTCCTCCTCCTCCTCGACAATGCTCTCTGCATCAGGTTTCCGGATCGGGTCGCCCCATCCATCCGCGACCAAACCGACCAACAGCGCTTCCAGGTCGCCGTCTTCGCCCTCGGAAGCTTCTGGCGATCCGAAGCCGTCTTTGGCTGCTTGCCCGGCGTTGTTCGCACCACCGTCGGCTACGCCGGAGGCTCCAAGTCCAACCCCGAATACCGAAGCATCGGTGACCATGCCGAATCCGTCAAGGTTGAGTATGATCCACAGCTGATTAGTTTTAGGGAACTCCTGGATGTCTTTTGGTCAAGCCATGATCCTAGGCAAGTGTATGGTCAAGGTCCTGATGTGGGTAATCAATACAGATCTATTATTTTTGTCAATGGAACCGAAGAATCAAGAATGGCTGCTGTCAGCAAAGAGCAGGAACAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAGATTCTGCAACTAGGAACATTTTACCCTGCAGAGCCAGAGCATCAGAAATTTGAACTCAAGCAAAATACCATCCTTCTTCAGTTAATTGGAAACCTTCCTGAAGAGGAGCTCGAGAGGTCTAGCCTGGCAACGAAATTGAATGGATATGTAGCAGAGCTTTGCCCTCCAGATATCCAAAAGCATATTGATTCCAAGATCAATGATATTATTAAAAGGGGTTGGCCCATGTTGAGGGATTTGTAG 1047 0.4842 MVIYEPGGKAQQLAAFGFHLYLFGFMRKLTEKGGAMAAVLNQKRVTKRHIGGGWLSRWAVRTFTSLKRQPKLVPRALGSILAETSATPGRVCEMAVSERNHNHSHYHQLFSMLIVLFLLLLDNALCIRFPDRVAPSIRDQTDQQRFQVAVFALGSFWRSEAVFGCLPGVVRTTVGYAGGSKSNPEYRSIGDHAESVKVEYDPQLISFRELLDVFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTILLQLIGNLPEEELERSSLATKLNGYVAELCPPDIQKHIDSKINDIIKRGWPMLRDL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03807 348 Gene3D Peptide methionine sulphoxide reductase MsrA 141 341 IPR036509 GO:0008113
Spst3g03807 348 SUPERFAMILY Peptide methionine sulfoxide reductase 138 289 IPR036509 GO:0008113
Spst3g03807 348 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 146 300 IPR002569 GO:0008113
Spst3g03807 348 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 100 318 - -
Spst3g03807 348 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 148 288 IPR002569 GO:0008113
Spst3g03807 348 Pfam Peptide methionine sulfoxide reductase 149 289 IPR002569 GO:0008113
Spst3g03807 348 FunFam Peptide methionine sulfoxide reductase A5 142 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03807 Spst-Chr3 88034559 88040202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03807 K07304 - gmx:100782739 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03807 3 88034559 88040202 Spst3g03807 3 88034559 88040202 ECH