Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03778 ATGGCGTCTGAAAACCCTAACGGGAAAAACTCTCTCAATCCGCAGGTAATAATCGATGCAAGCCCCGAACCATGCTCTTCCAACTCTTCCTCCAATCTCTACCCCAAAATCGATGAGGTTGGAAATCTCCTCCCGGACAATTTCAGTCCCTCGGCGCCACCGCTCGCCGCCGCCGAGGAGGTTCTCATCAAGGTCCCCGGCGCCATCCTCCACCTTATCGACAAGGAATGTAGCGTGGAGCTCGCCTGCGGCGTCCTCACCATCATCTGCCTCCGACAGGGGACAAATATAGTCGCCTTTTATGCAAGAGTCGGTGACATACAGTGGCCCCTGGCGAAGGACGAGGCAGCCGTCAAGGTCGACGATTCGCACTACTTCTTCTCTCTCATGTCGAAGGAATCCAAATCAGATTCCTCCAGTGATGAAGAGGAAAAAGGTGGAATACTTCACCTCCGCTGGAACAGGAAGAAGAAAAACAAGCACTCCGGTTCAGATTCCGTTCCCGACGTACTGAGCTACGGCTTAACGATAGCGTCGAAGGGGCAGGAGAATTTGCTGAAGGAGTTGGACAAGGTTTTTCAGGAATGCAGTGCTTTCTCGGTGCAGAAGGTGTCAGAGAAGGCCAAGAAGGAAGGGGAGGCGTTGGATCCATCAGTGGCGAAGGAGGTATCACCGACGGATTTGAAGACAGAGGAGAAGAAGGAGATGTTGGAGGAGAACTGTGCGGCCTATTGGACCACGTTGGCTCCTAATGTAGAGGATTACGGTGGAACCGCTGCGAAGCTTATTGCGGCTGGTTCTGGACAACTGGTGAAGGGAATTTTGTGGTGTGGGGATGTGACGGTGGAACGGTTGCGGTGGGGGAATGAGATCATGAAGACGAGGATGGCTCCCGGTTCGCAGGAAGAGATTAATCCCGAAACCCTGAAGCGGATACAGAGGGTTAAGAGAATGACCCAAATGACAGAGAGTGTAGCAAATGGGGTTCTCACTGGGGTTGTGAAGGTCTCTGGATATTTTAGTAGTTCAGTGGCAAATTCAAAAGTGGGAAAGAAATTTTTCAGCTTTCTACCTGGCGAAGTTGTGCTTGCATCATTGGATGGATTCAGCAAAGTGTGTGATGCGGTTGAAGTAGCAGGAAAAAGTGTCATGTCAACGTCAAACACTGTTACAACTGATCTTGTAAATCACAGATATGGAGAAGAAGCTGCTAAGGCAACAAGTGAAGGGCTGGATGCTGCTGGTCATGCTGTGGGGACTGCATGGGCTGCATTTAAGCTTCGACAGGCCTTGAATCCTAAGAGTGTTATAAAACCTACTGCACTGACCAAATCTGCAGCTCAAGCTGCTGCCGCTGAACTTAGGGGTAAACTATCCAAGTGA 1383 0.5061 MASENPNGKNSLNPQVIIDASPEPCSSNSSSNLYPKIDEVGNLLPDNFSPSAPPLAAAEEVLIKVPGAILHLIDKECSVELACGVLTIICLRQGTNIVAFYARVGDIQWPLAKDEAAVKVDDSHYFFSLMSKESKSDSSSDEEEKGGILHLRWNRKKKNKHSGSDSVPDVLSYGLTIASKGQENLLKELDKVFQECSAFSVQKVSEKAKKEGEALDPSVAKEVSPTDLKTEEKKEMLEENCAAYWTTLAPNVEDYGGTAAKLIAAGSGQLVKGILWCGDVTVERLRWGNEIMKTRMAPGSQEEINPETLKRIQRVKRMTQMTESVANGVLTGVVKVSGYFSSSVANSKVGKKFFSFLPGEVVLASLDGFSKVCDAVEVAGKSVMSTSNTVTTDLVNHRYGEEAAKATSEGLDAAGHAVGTAWAAFKLRQALNPKSVIKPTALTKSAAQAAAAELRGKLSK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03778 460 PANTHER SPARTIN 28 454 IPR045036 -
Spst3g03778 460 Pfam Senescence domain 262 447 IPR009686 -
Spst3g03778 460 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03778 Spst-Chr3 87821766 87824885 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03778 K19366 - gmx:100777392 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03778 3 87821766 87824885 Spst3g03778 3 87821766 87824885 ECH
Spst3g03778 3 87821766 87824885 Spst3g03778 3 87821766 87824885 PCT