Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03743 ATGGAAGAATGCTTGCTTGCAAGGCTCTCCGGATGCATTGCAGGGCCAACTTGCGAAGCCAGACTTGTCTCAATTGGTTATGAGCAGGCAGCATCTGATGCTGAAGTTGCAGCACATGGAAAATGGCAATGGTGTTTCCTTTCTAGATTCAACAAGACCATGCCTTCTACCCTTATCACAATTGAAGTCATACCAATTCCCAATCAAGCATCCTTGTGTTTTGTGCACCACAACAAGGACAGGATGGAAGCTATTTCTACATTGCCAAGTGCTCATCAACCAGTGAGGTCCATTAGTTTGCCCACAAGAGTGCACCCTTCTTCTCAAAGAGTTGAAGAACTTTTGAACCATCTTAAGCCTCGCCATCTTCCCCAATCTGTCTCAAGAACCACAGGTTTGGAAGCAGAGACAATTCAAAGCGATTTGGTTGTGCTTGCTGAGTTGTACAACTGCATGGAGGAACTCTTCCAATCTCCTCAGACCCAACAAACACTTTTGCACTACCAGAATGGGAAGCTAGTGGAAGAGGCATTGTGTGGCTCAGTCACACTACTTGATGCATGTGGAAGTGCAAGGGATTTGTTATTTGCTCTAAAAGAACAAGTGCAAACTCTTCAGTCAGCCATGCGTAGAAGAAGAGGAGATTCAAGCATTGAAAACAGCATTTGTGAATATAATAGCTTCAGGAAGAAGGCCAAGAAGGATATTGCCAAGCAACTAGGGGCAATGAAGAGAATGGAGAATAAAGTTAATTGTTGTTCTCTAATGAGTCAAACTCAAGATCAGCATTTGATATTCCTGGCCAAAGTCCTAAGAGAAGCAAGCACCATCACTATCTCTATATTTCGTTCTCTTTTGCTGTTCCTGTCAATGCCAGGAGTCAGAACAAAAGGGGCCTCCATGATCTCAAAGCTAAAGTCAACTAGATTGTTTGCTTCAGAGAAAGAACAGAAGAACACAAATGTTGTGGACCTTAGTGCTGTGTGCTCCCTCCTTGAAAGAGGAAAACACAGTGATGCCAAGGTTGAAGTTCAGAGTACTCTAAGAGTGTTAGAGACATTGAATGTTAGCATTGATGGTCTTGAAGGTGGATTAGATTGCCTTTTCAGACGTATAGTTCAAAATAGAGTGTCATTTCTTAATATGCTTGCTCATTAG 1158 0.4266 MEECLLARLSGCIAGPTCEARLVSIGYEQAASDAEVAAHGKWQWCFLSRFNKTMPSTLITIEVIPIPNQASLCFVHHNKDRMEAISTLPSAHQPVRSISLPTRVHPSSQRVEELLNHLKPRHLPQSVSRTTGLEAETIQSDLVVLAELYNCMEELFQSPQTQQTLLHYQNGKLVEEALCGSVTLLDACGSARDLLFALKEQVQTLQSAMRRRRGDSSIENSICEYNSFRKKAKKDIAKQLGAMKRMENKVNCCSLMSQTQDQHLIFLAKVLREASTITISIFRSLLLFLSMPGVRTKGASMISKLKSTRLFASEKEQKNTNVVDLSAVCSLLERGKHSDAKVEVQSTLRVLETLNVSIDGLEGGLDCLFRRIVQNRVSFLNMLAH 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03743 385 PANTHER OS06G0725500 PROTEIN 92 383 - -
Spst3g03743 385 Coils Coil 229 249 - -
Spst3g03743 385 Pfam Protein BPS1 142 382 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03743 Spst-Chr3 87439919 87442824 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03743 - - vun:114174878 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03743 3 87439919 87442824 Spst3g03743 3 87439919 87442824 ECH
Spst3g03741 3 87428744 87429616 Spst3g03743 3 87439919 87442824 PCT
Spst3g03743 3 87439919 87442824 Spst2g00970 2 8348723 8349658 PCT