Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03742 ATGGCAAATAAGTACCATGTTCGCTCAATTAGTTTGCCCCCTAGATCTCATCCTAGCACCGTTAGAGTGGAGGAGGAGCTGAGCAAGCTAAAGACTTGGGAAGGAACATCCACATCCACCTCAGAGTCCATTCACACTGGACTATCCTTGCTTCAAGATTTGTACCTTTCCTTGGATGATCTTCTCAACATGGCATCCACCCAACAAGTGATTTCTCTCCACAAATGTGACAAGTGCGTGGACGAGGTTTTGGATGGTTCTATGAGAATTTTGGATATATGTGGCATCACGAGGGACACCATGCAGCAAATTAAGGAAATTGTCCAAGCCCTTCACTCTTCCCTTCGAAGAAGAAATCGAAAAGGAGACTCGAGTTTTGAGACCAGTGTGACCGAGTACAAGTTGTTCACCAAGAAGATGAAGAAGAATTCCAATAAGTTGATCACATCATTGAAGCAGATGGATGGCAAATTTGGGGTATCCCCACTTCTGGATCTTGATCACCACCTGGCTGCTGTGATTAGAGTGCTTAGGGAAGTCATTATAATCAACTTGTTAGTCTTCCAATTTATTTTGTCATTCTTGACCGCGTCTTCATCGAATTCAAAGGCAACCAAATGGTTGGTTGTGGCAAAATTGATGCACAAGGGGGTCAAATCATGGGAAGACAACTCCGGGAATGTGAACGAGTTGCAGTGTGTTGAAACAGCTTTGAGTACCCTTCTGAATGAGGGCACTGATGATGAGAAGATGCAGGTAGCACATGAAAGATTGGAGGCTTTGAAGAATGCCATTGAAAGAATTGAGAACAGTTTAGAGAGTGTGTTTAGGCGCTTGATTAAGACCAGAGCTTCTCTTCTGAACATAATCTCCCAATAG 879 0.4357 MANKYHVRSISLPPRSHPSTVRVEEELSKLKTWEGTSTSTSESIHTGLSLLQDLYLSLDDLLNMASTQQVISLHKCDKCVDEVLDGSMRILDICGITRDTMQQIKEIVQALHSSLRRRNRKGDSSFETSVTEYKLFTKKMKKNSNKLITSLKQMDGKFGVSPLLDLDHHLAAVIRVLREVIIINLLVFQFILSFLTASSSNSKATKWLVVAKLMHKGVKSWEDNSGNVNELQCVETALSTLLNEGTDDEKMQVAHERLEALKNAIERIENSLESVFRRLIKTRASLLNIISQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03742 292 PANTHER OS06G0725500 PROTEIN 2 290 - -
Spst3g03742 292 Pfam Protein BPS1 47 289 IPR004320 GO:0048364|GO:0048367
Spst3g03742 292 Coils Coil 251 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03742 Spst-Chr3 87435715 87436593 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03742 - - gmx:100811784 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03742 3 87435715 87436593 Spst3g03742 3 87435715 87436593 ECH
Spst2g00972 2 8364485 8365399 Spst3g03742 3 87435715 87436593 PCT
Spst3g03742 3 87435715 87436593 Spst3g03741 3 87428744 87429616 PCT