Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03736 ATGTTCTGGACTCGTTCTCTCAGACTTTTCAGATCACCTCGCATCTTCTCATGTCACCGTCATTCGCGCAAATTTTGTAGCTTTTCGCAGGACAATGATCCGGGTTCGTGGGAATCGATGGAGGGTCTTTTTCATTGCTCTGCGAATTTTGTTCCTTTGACTCCCATCAGCTTCCTAGAGAGAGCAGCGAAGGTATGCAGAGACAGAACCTCGCTCGTGTATGGCTCTCTGGAATATAACTGGGGTGAAACCCATCAACGCTGCTTGAAACTCGCTTCTGCTTTGACCCAGTTGGGAATTTCTCGCGGCGATGTGGTTGCTACCCTATCACCTAACGTCCCAGCAATGTATGAGTTACATTTTGCTGTCCCAATGGCTGGAGCCATTCTTTGCACCCTTAACTCACGCCTAGATGCAGCTATGGTTTCAGTCCTTCTGGAGCATTCACAAGCAAAGGTCCTTTTTGTAGACTACCAATTACTTGAAATTGCACGAGGAGCTTTGGACTTGCTAGGCAAAATAGCCAGAGAATTGCCAATTTTAGTTCTAGTTGCCGACTCTGATTGCCCATCTACCATTGACATTACATCAGTTAGTTACGAGTATGAGAGGCTTCTGGCTGATGGGCACAATGGTTTTGACATTGTGAGACCCCATAGTGAATTGGATCCTATAAGCATAAACTACACCTCAGGCACTACATCTAGACCTAAAGGAGTTGTCTATAGTCACAGGGGTGCTTATCTTAACTCTCTAGCAACTGTTCTACTCTTTAGAATGGACCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAATGGGTGGTGCCTCCCTTGGGGTGTAGCGTCACAATTTGGGATCAATGTTTGTCTTAGGAAGGTCTCTCCGAAGAACATTTTTGACAATATTACTCAGCATAAGGTGACACACATGGCAGGAGCACCAACAGTGCTGAACATGATCGTGAACTCAGCATTGACCGACCGAAAGCCACTCAATCAGAAGGTGGTGGTGCTGACAGGAGGTTCACCTCCACCGCCACAGATCCTTGCCAAGATGGAGGAGATTGGGTTTAGCATCTCTCACCTGTATGGCCTCACAGAAACGTATGGTCCAGGCACGTTCTGTGCTTGGAGGCCTGAGTGGGACTTGTTGCCCCCTGAAGATAGATCAAAGATGAAAGCAAGGCAGGGGGTCCCGCATGTGGCTTTGGAGGAAATTGATGTGAAAGATCCTGCCTCAATGGAAAGTGTTCCATCTGATGGCAAAACAATGGGAGAAGTAATGTTTAGAGGAAACACAGTGATGAGTGGATATTTCAGGGATTTGAAAGCAACAGAAGAAGCTTTCAAAGATGGGTGGTTTCATAGTGGGGATCTAGCTGTGAAACACTCTGATGGTTACATAGAAATGAAGGACAGGTTGAAGGACATAATAATCTCTGGGGGGGAGAATATTAGCTCAGTTGAGGTAGAAACGGTTTTGTATAGCCATCCAGCAGTTCTTGAAGCTGCAGTTGTTGCCAGGCCTGATGATCATTGGGGCCAAACTCCTTGTGCTTTTGTGAGGTTGAAAGAGGGGTTTGATGTAGACGCTCAAGACATAATCAACTTTTGCAGGGACCATTTGCCCCATTACATGGCTCCTAAAACAGTTATTTTTCAAGACATGCCAAAAACTTCAACCGGAAAGATACAGAAGTATGTTCTGAGGGAGAAAACCAAAACTTTGGGAAGCCTTTCTGGACCCCAAGGTTGTGATAAATTGTATAGTTAA 1785 0.4555 MFWTRSLRLFRSPRIFSCHRHSRKFCSFSQDNDPGSWESMEGLFHCSANFVPLTPISFLERAAKVCRDRTSLVYGSLEYNWGETHQRCLKLASALTQLGISRGDVVATLSPNVPAMYELHFAVPMAGAILCTLNSRLDAAMVSVLLEHSQAKVLFVDYQLLEIARGALDLLGKIARELPILVLVADSDCPSTIDITSVSYEYERLLADGHNGFDIVRPHSELDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGINVCLRKVSPKNIFDNITQHKVTHMAGAPTVLNMIVNSALTDRKPLNQKVVVLTGGSPPPPQILAKMEEIGFSISHLYGLTETYGPGTFCAWRPEWDLLPPEDRSKMKARQGVPHVALEEIDVKDPASMESVPSDGKTMGEVMFRGNTVMSGYFRDLKATEEAFKDGWFHSGDLAVKHSDGYIEMKDRLKDIIISGGENISSVEVETVLYSHPAVLEAAVVARPDDHWGQTPCAFVRLKEGFDVDAQDIINFCRDHLPHYMAPKTVIFQDMPKTSTGKIQKYVLREKTKTLGSLSGPQGCDKLYS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03736 594 PANTHER ACYL-ACTIVATING ENZYME 41 583 - -
Spst3g03736 594 Pfam AMP-binding enzyme C-terminal domain 493 567 IPR025110 -
Spst3g03736 594 SUPERFAMILY Acetyl-CoA synthetase-like 37 577 - -
Spst3g03736 594 FunFam Long-chain-fatty-acid--CoA ligase FadD 41 479 - -
Spst3g03736 594 Gene3D - 479 580 IPR045851 -
Spst3g03736 594 Pfam AMP-binding enzyme 60 484 IPR000873 -
Spst3g03736 594 CDD ttLC_FACS_AEE21_like 50 575 - -
Spst3g03736 594 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Spst3g03736 594 FunFam 2,3-dihydroxybenzoate-AMP ligase 479 581 - -
Spst3g03736 594 Gene3D - 43 478 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03736 Spst-Chr3 87387830 87390910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03736 116 584 Miscellaneous Gene Families AT1G20560 62.845 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03736 - - gmx:100500429 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03736 3 87387830 87390910 Spst3g03736 3 87387830 87390910 ECH
Spst3g03736 3 87387830 87390910 Spst3g03736 3 87387830 87390910 PCT