Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03717 ATGTTTGTGAAGAAATTAATGGAGAAAGCTTCCATCAAGAAGAGTGGTGGAAATTCATCAGATGGGTTAAAAGCAAGTGATGTAGATCCACGGTTGGTATTTCATCATGGGGTGCCATCTGGTGGTGCCAAGTTCGCCTATGACACCATTCAGAGGATACTGGCTCTTTCAACAAAGAATGGCCAGATTAAACTATATGGAAAAGATAATGCTCAAGCCATACTTGAATCTAGTGAAGCCCTGCCTAGCAAGTTTCTACAGGTTTGGGACATAGACAAGAAATCGTTATCCGATGTGTACATTGCTAAAGAAGAAATCACGTGCTTTGCAGTCATTCGACATAGCCTCTACATGTACATCGGGCATTCCAATGGTGATATTTCAGTTTTGATGCTTAATCAAGAACCATCATGGCATTTGGTTCAGATGAAATACACCATACCTCTATCAGCTTCCTATGGGATCTCTGAAGTGTCTGATGATACTGTTGTGACAAACATACTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCATAATCTTTAGAAATGGCCAAATGATATTATGGGATGTTCAGGAAAGTAGATCTATTTTAAGAACTGGTGGAAATATGTTGCAGACATTGCATAATGAAACAAAAAAAGTGACTTCTGCATGTTGGGTGTGTCCTTTTGGAAGTAAAGTGGCTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCGTCGATTCTTTAAATATAGGAAATGGCTCAGCACCTGAATGTAGTTATCAAAACACTCCATTGCTCAAACTTAACTTAGGATATAAGTCAGAAAAAATCTCCATAGGATCAATAAAATGGGTTTATGCTGGAGGAAAGGCTAGTCGAGTATATGTTATGGGAGCTTCTGACTATGCAACTTCAAACTTGTTGCAGGTAGTGTTGCTGAATGAGAATACAGAATCTCGCACAATTAAGCTTGGACTTCATCTGTCTGAATGTTGCACTGACATGGAGATCATATCATCAACTTCAACTGAGCAAAGCAAGCATAAACAAAATTCTTTCATTTTGCTTGGGAAGTCTGGCCATCTATATTTGTATGACGATAGTTTGATTGAAAGGTATCTGCTACAATGCCAATCTAAGTCCACACCTTCACTTCCAAGGGAAGTAATTGTGAAGTTACCACTGATAGAAGCAAGCATCACAACAGCAAAATTCATCTCCAACAATTCCAATGTGTTAAATTCTGCAGATGAGCTCTTCAAAAACTATCCATTGTTTGTTCCTGTTGAAACAAATCAGAAGGATGGGATTAGCCTAAGTTCTGCCAAATTTACTGGATTTTCCAAAGTTCAAAACTTGTACATAACTGGACATAGCAATGGAGCCATAACCATCTGGGATGCTTCATGCCCCAATTTCATTCCAATTTTGCAGTTGAAGCAACAGAGTGAAAATGACTGTTCATTAAGTGGTATACCATTGACAGCATTATACTTCGATAGCAATTCTCCACTTCTTGTTTCTGGTGACCAGAGTGGGATGAAAGGGACTGATCATATAATCCAAAGTGTGAAAAGTGTGAAGAGTACTGGTGCCATTCTTTCAATGAACATAGATCCCAGTTCAATGCATCTTGCCGTTGGTTCAGATCAAGGACATGTTTCAGTTTTTGACATAGATGGCCCAACTTTGTTATACCAGAAACATATTGCGAGTGAACTTTCTGCTGGTATCATCTCTCTGCAGTTCCTAACCTGCAGTTTACATGGTTTTGAAAAAAACATTTTAGCAGTTGGAACAAAAGATTCATCTGTTATGTCAATAGATAAAGAAAATGGAAACACACTAGGAACGGGAACTATTCATCCCAAGAAGCCCTCTAAAGCTCTATTTATGCAGGTTTTGGATGGACAAGGTAGACCGGTCACGGGATCAATTACTAAAGATGGATTAGACTTGAGTGAAAGGAACCATATTGAGGATGCAACAACGAAGCAGCAGTACATTCTGCTTTGTTCTGAGAAAGCTTTATATGTCTATTCATTGGTCCATGCGATTCAGGGAGTTAAAAAGGTGCTATACAAGAAAAAGTTTCATTCCTCTTCATGTTGCTGGGCATCAACATTTTGTAGCCATTCTGATGTCGGCCTTGTACTTATTTTCACTAGTGGAAAAGTAGAATTAAGGTCTTTGCAAGAATTATCCCTGATTGTGGAGACTTCAATTAGAGGTTTCAGTTATTCTCCTCCAAAATCGAAGTCATTTTCAGATAGCCAGATATGTTGTTCTTCCAAAGGAGATATTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCATTGTTGGCCGGAAGGAATATTTTCAGGTTTTTGGACTCTATTAGCCACATCTACAGGAAAGAAATATTGCTTTCACAAGACGAGCTTGCCCCTAGCCCAGTCGTAAATAAGGAAAAGAAAAGGGGTATATTCAGCTCTGTCATCAAAGATTTTACTAGCAGTAAAGAAAAGCATGCTCCCATCTTGGAAACAGAAGATTCTAAAGAAAGTATCCAAGAACTCTCAGCTATCTTTTCAAATGAAAATTTTCCATGTGATGCTGATAATAATGATAATCTGACCGTTGATGAAGATGAGCTTGAAATAAGTATAGATGACATTGACCTAGATGATCACGAAGAAAAACACAAAGATCAAGGTATATTGGGAGGTCTTGGTAAGAAGAAATTGACCGGAAAGTTTCAGGCTCTAAAAGGAAGATTAAAAGAGATGACGGGTAACATCCAGAAAACATCAGGTAAAGAAGAACAACAAGATGAGCAAGCTGGTGCTGTCGATCAAATTAAGAAGAAATATGGGTGTTCTTCGTCCAATGAAACAAGCGTTGCTAAGTTGGCACAAAGCAAATTGCAGGAGAACATGAATAAGTTGCAGGGAATCAACCTCCGAACCACAGAAATGCAAGACAAAGCAAAATCATTTTCATTATTAGCGAACCAAGTGCTGCGAATTGCTGAACAGGATAAACGAAAATAA 3033 0.3867 MFVKKLMEKASIKKSGGNSSDGLKASDVDPRLVFHHGVPSGGAKFAYDTIQRILALSTKNGQIKLYGKDNAQAILESSEALPSKFLQVWDIDKKSLSDVYIAKEEITCFAVIRHSLYMYIGHSNGDISVLMLNQEPSWHLVQMKYTIPLSASYGISEVSDDTVVTNILPQPAAESKRVLIIFRNGQMILWDVQESRSILRTGGNMLQTLHNETKKVTSACWVCPFGSKVAVGYNNGELFIWSVDSLNIGNGSAPECSYQNTPLLKLNLGYKSEKISIGSIKWVYAGGKASRVYVMGASDYATSNLLQVVLLNENTESRTIKLGLHLSECCTDMEIISSTSTEQSKHKQNSFILLGKSGHLYLYDDSLIERYLLQCQSKSTPSLPREVIVKLPLIEASITTAKFISNNSNVLNSADELFKNYPLFVPVETNQKDGISLSSAKFTGFSKVQNLYITGHSNGAITIWDASCPNFIPILQLKQQSENDCSLSGIPLTALYFDSNSPLLVSGDQSGMKGTDHIIQSVKSVKSTGAILSMNIDPSSMHLAVGSDQGHVSVFDIDGPTLLYQKHIASELSAGIISLQFLTCSLHGFEKNILAVGTKDSSVMSIDKENGNTLGTGTIHPKKPSKALFMQVLDGQGRPVTGSITKDGLDLSERNHIEDATTKQQYILLCSEKALYVYSLVHAIQGVKKVLYKKKFHSSSCCWASTFCSHSDVGLVLIFTSGKVELRSLQELSLIVETSIRGFSYSPPKSKSFSDSQICCSSKGDIVLVNGDQEIFVVSLLAGRNIFRFLDSISHIYRKEILLSQDELAPSPVVNKEKKRGIFSSVIKDFTSSKEKHAPILETEDSKESIQELSAIFSNENFPCDADNNDNLTVDEDELEISIDDIDLDDHEEKHKDQGILGGLGKKKLTGKFQALKGRLKEMTGNIQKTSGKEEQQDEQAGAVDQIKKKYGCSSSNETSVAKLAQSKLQENMNKLQGINLRTTEMQDKAKSFSLLANQVLRIAEQDKRK 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03717 1010 Gene3D - 83 406 IPR015943 GO:0005515
Spst3g03717 1010 Gene3D - 445 807 IPR015943 GO:0005515
Spst3g03717 1010 SUPERFAMILY WD40 repeat-like 528 788 IPR036322 GO:0005515
Spst3g03717 1010 Pfam Lethal giant larvae(Lgl) like, C-terminal 671 786 IPR013905 -
Spst3g03717 1010 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 7 512 - -
Spst3g03717 1010 SMART WD40_4 384 465 IPR001680 GO:0005515
Spst3g03717 1010 SMART WD40_4 202 242 IPR001680 GO:0005515
Spst3g03717 1010 SMART WD40_4 518 556 IPR001680 GO:0005515
Spst3g03717 1010 CDD R-SNARE_STXBP5_6 946 1002 - -
Spst3g03717 1010 SUPERFAMILY WD40 repeat-like 83 603 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03717 Spst-Chr3 87194657 87205040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03717 - - gmx:100811900 1677.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03717 3 87194657 87205040 Spst3g03717 3 87194657 87205040 ECH
Spst3g03717 3 87194657 87205040 Spst3g03717 3 87194657 87205040 PCT