Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03697 ATGGAAGAGAAGAGAAGAAGAATAAAAAAGAAGGGGAAGGAAGGGTGGAATAAAAAAGGGAATAAGTGGGAGAGAGAAGGGAAGCACGCTGTCCGCGTGGGGAACGGAGGAGCGCGGCAAGCAGAGGAGGGGTTCTATAAAAAACCTTCAAAACTCTCGCTCTTCCTTTCAACTCCAAATCCATTTCTGCCACTCTCCCTCTCCCATTTTTATCTCTTAACCTCCTCAACTTCCTTCACCCTCCAGCTTCTGGGTTCTCCGCTTTCCCTCGTCTTCTGCATCTGCATTCTGCGGATCAGTTCGACTCGGAAAATGGACCTTCGCCGCCGCCCCATCCCCGCCACCGCTCACCCACTCAAAACCCAGAAGCTCAATAACAACAACCTCACCACCACCACCACCACCACCACCACCACCACCAACGCCACTCACTCCCACGCGCCATCGCCAGCACTTCTCCCACTCTACCTCACCAACGCCCTCTTCTTCGCCACTTTCTTCTCCCTCGCCTACTTCCTCCTCCACCGCTGGCGCGACAAGATCCGGACCGCCACCCCTCTCCACGTCGTCACCCCTGCGGAAACCGCCGCCATCGTCTCCCTCGTCGCATCCGCCGTCTACCTCCTGGGCTTCTTCGGCGTCGCCTCCCGCACCTCCCTCGACGAGCTCTCCGACGAGGAAACCATCCTCCGCGAAGACTCTCGCGCTCCTGGCCCTTGCCCCGCCGCGCTCCTCGACTCCCCGGCTACCAAGAAAAAGTACAATCAAATTCCTCTCCCACGCTCCAAATCTGTTGACAAATCGGTGCCCAACGAGTTGTCAGCTCCTCCACCTCTAAAAGCCGCTGACATGGCAGCACCGGCACCCGCACCAGCACCGATCTCCCTGTCTCCCGAGGACGAGGAGGTCGTGGAGGCGGTGGTGTCGGGGTCGGTCCCGTCGTACTCGTTGGAGTCGCGCCTCGGCGAGTGCGGTCGGGCGGCCGCGATCCGGCGCGAGGCGGTGCAGAGGCTCACGGGGCGGTCGCTTGAGGGTTTACCCGTGCAGGGGTTCGACTACGAGTCGATATTGGGGCAGTGCTGCGAGATGCCGATAGGGTTCGTGCAGATTCCCGTTGGGGTAGCAGGGCCCTTGTTGTTGGATGGGAAGGAGTACACTGTGCCTATGGCCACCACTGAAGGGTGTCTCGTGGCCAGCACCAACAGAGGATGCAAAGCTATTTACGTCTCCGGTGGTGCTTCCTCTGTTCTTCTCAGGGATGGCATGACCAGAGCACCCGTTGTCAGGTTGCCCTCTGCTCAGCGCGCGGCGCAGTTGAAGTTCTTCTTGGAGGATCCTCTCAATTACGATTCCCTTGCCGTTGTTTTCAACAAGTCAAGCAGATTTGCCAGGCTGCAGAGTATTCAGTGTGCTATTGCGGGCAAGAATTTGTACATGAGATTTCGATGCAGCACTGGTGATGCCATGGGGATGAACATGGTGTCAAAAGGTGTTCAAAATGTCCTTGATTTTCTTCAGACAGACTTCCCTGACATGGATGTTATTGGAATCTCTGGAAATTTCTGTTCGGACAAGAAAGCTGCAGCTGTTAACTGGATTGAAGGCCGTGGCAAGTCTGTGGTGTGTGAGGCCGTAATTAAGGAGGATGTGGTGAATAAGGTGTTGAAGACCAGTGTCGAGGCCCTAGTCGAGCTTAACATGCTAAAAAACCTTACTGGCTCAGCTGTGGCTGGTGCTCTTGGTGGGTTCAATGCCCATGCTAGCAATATTGTGTCTGCTATCTACATAGCTACTGGTCAGGATCCTGCCCAGAATGTGGAGAGTTCTCACTGCATCACCATGATGGAAGCTGTCAATGATGGCAAGGACCTTCACGTTTCTGTGACCATGCCCTCAGTTGAGGTTGGTACTGTTGGAGGGGGCACACAGCTCGCATCTCAGTCTGCATGTCTTAATTTACTTGGTGTCAAGGGTGCCAATAAAGAATCTCCTGGTGCAAATTCTAGGCTACTGGCCACCATTGTAGCCGGTTCAGTCCTGGCCGGGGAGCTATCACTCATGTCTGCAATTGCAGCTGGCCAACTTGTAAAGAGCCACATGAAATACAACAGATCTAGCAGGGATATGTCTAAAATTGTCTCCTGA 2145 0.5487 MEEKRRRIKKKGKEGWNKKGNKWEREGKHAVRVGNGGARQAEEGFYKKPSKLSLFLSTPNPFLPLSLSHFYLLTSSTSFTLQLLGSPLSLVFCICILRISSTRKMDLRRRPIPATAHPLKTQKLNNNNLTTTTTTTTTTTNATHSHAPSPALLPLYLTNALFFATFFSLAYFLLHRWRDKIRTATPLHVVTPAETAAIVSLVASAVYLLGFFGVASRTSLDELSDEETILREDSRAPGPCPAALLDSPATKKKYNQIPLPRSKSVDKSVPNELSAPPPLKAADMAAPAPAPAPISLSPEDEEVVEAVVSGSVPSYSLESRLGECGRAAAIRREAVQRLTGRSLEGLPVQGFDYESILGQCCEMPIGFVQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIYVSGGASSVLLRDGMTRAPVVRLPSAQRAAQLKFFLEDPLNYDSLAVVFNKSSRFARLQSIQCAIAGKNLYMRFRCSTGDAMGMNMVSKGVQNVLDFLQTDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEDVVNKVLKTSVEALVELNMLKNLTGSAVAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGKDLHVSVTMPSVEVGTVGGGTQLASQSACLNLLGVKGANKESPGANSRLLATIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDMSKIVS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03697 714 Gene3D - 296 370 IPR023282 GO:0004420
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 387 407 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 478 496 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 518 543 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 569 595 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 623 644 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 360 381 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 421 537 - -
Spst3g03697 714 CDD HMG-CoA_reductase_classI 309 704 IPR004554 GO:0004420|GO:0005515|GO:0008299
Spst3g03697 714 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 635 642 IPR023076 GO:0004420
Spst3g03697 714 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 296 370 - -
Spst3g03697 714 MobiDBLite consensus disorder prediction 1 29 - -
Spst3g03697 714 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 421 537 IPR009023 -
Spst3g03697 714 Gene3D - 421 537 IPR009023 -
Spst3g03697 714 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 300 704 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 480 494 IPR023076 GO:0004420
Spst3g03697 714 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 300 704 IPR004554 GO:0004420|GO:0005515|GO:0008299
Spst3g03697 714 Gene3D - 371 691 IPR023074 GO:0004420
Spst3g03697 714 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 689 702 IPR023076 GO:0004420
Spst3g03697 714 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 134 707 IPR002202 GO:0004420|GO:0015936
Spst3g03697 714 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 297 693 IPR009029 GO:0015936|GO:0016616
Spst3g03697 714 MobiDBLite consensus disorder prediction 260 287 - -
Spst3g03697 714 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 524 699 - -
Spst3g03697 714 Pfam Hydroxymethylglutaryl-coenzyme A reductase 328 704 IPR002202 GO:0004420|GO:0015936
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03697 Spst-Chr3 86970446 86974330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03697 67 710 Lipid Metabolism Gene Families AT1G76490 64.848 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03697 K00021 - gmx:100815480 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03697 3 86970446 86974330 Spst3g03697 3 86970446 86974330 ECH
Spst3g03697 3 86970446 86974330 Spst3g03697 3 86970446 86974330 PCT