Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03696 ATGAGAATTTTCCCAAACACCTTCTTCACCAAAGCCCGCAACGTCATAGGCTTCGGCCTCGCTTCCACAGCCGCCGCCGCAGTCGTGGCTTCCTCCGTGTCTTCTTCTCCTTCATCTTCTCCCTCATTCACTTCCACTTCTACCTCTTCTTCCGATGCTGACGATACTTCATCCTCCGACGTGGAAATCGTCCACCGGAAAATACTGAAAACGAAGCTTTGCATTATCGGCAGCGGGCCGGCGGCACACACTGCCGCTATATACGCCGCGCGAGCGGAGCTGAAGCCAGTCCTATTCGAAGGCTGGATGGCAAACGGCGTCGCTCCCGGAGGCCAGCTCACCACCACTACTGACGTTGAGAACTTTCCGGGATTCCCGGCCGGCATTCTTGGCGCCGAGCTCATGGACCGTTTCCGTCAGCAGTCGCAGCGCTTTGGCGCAGAGGTCGTTACGGAGACTGTGACGACGGTTGACTTCTCCGAACGGCCGCTTAGGGTTTTCACTGACTCCATCACCGTGGAAGCTGAATCCGTCATCGTCGCCACCGGCGCCGTTGCTAAGCGGCTGAATTTCGACGGCGCGGGTGACGGCCCGGGCGGGTTCTGGAACCGCGGGATATCGGCGTGCGCCGTGTGTGACGGTGCCGCGCCGATATTCCGTGGCAGGCCTCTGGCGGTGATCGGTGGCGGCGATTCTGCCATGGAGGAAGCTAGCTTCCTTTCCAAGTTTGGTTCCAAGGTGTATATAATTCATAGGAGGGACAAGTTTAAGGCTTCTAAGATCATGCAGAGGAAGCTGATGAATAATCCCAAAATTGAGGTATTGTGGAATTCAGTGGTGGTTGGGGCTTATGGGGATAATAAGGGTAAGGTTCTTGGAGGGGTTAAAGTGAAGAATGTGGTGACTGGAGTTGTGTCTGATTTGAAGGTTTCTGGTTTGTTCTTTGCAATTGGGCATGAGCCTGCCACTAAATTCTTGGATGGTCAACTTGAATTAGACCCTGATGGGTACGTTGTGACCAAACCTGGCACCACAAAGACCAGTGTTGATGGAGTTTTTGCTGCAGGTGATGTCCAGGATAAGAGGTATAGACAAGCTATTACCGCAGCTGGCACTGGGTGTATGGCAGCCTTGGATGCAGAACATTACCTGCAAGGCACTGGTTTACAAGATGGTAAGAGTGTTTGA 1188 0.5379 MRIFPNTFFTKARNVIGFGLASTAAAAVVASSVSSSPSSSPSFTSTSTSSSDADDTSSSDVEIVHRKILKTKLCIIGSGPAAHTAAIYAARAELKPVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGAELMDRFRQQSQRFGAEVVTETVTTVDFSERPLRVFTDSITVEAESVIVATGAVAKRLNFDGAGDGPGGFWNRGISACAVCDGAAPIFRGRPLAVIGGGDSAMEEASFLSKFGSKVYIIHRRDKFKASKIMQRKLMNNPKIEVLWNSVVVGAYGDNKGKVLGGVKVKNVVTGVVSDLKVSGLFFAIGHEPATKFLDGQLELDPDGYVVTKPGTTKTSVDGVFAAGDVQDKRYRQAITAAGTGCMAALDAEHYLQGTGLQDGKSV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03696 395 NCBIfam thioredoxin-disulfide reductase 72 384 IPR005982 GO:0004791|GO:0005737|GO:0019430
Spst3g03696 395 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 209 231 IPR008255 GO:0016491
Spst3g03696 395 FunFam Thioredoxin reductase 196 322 - -
Spst3g03696 395 Pfam Pyridine nucleotide-disulphide oxidoreductase 72 372 IPR023753 GO:0016491
Spst3g03696 395 Gene3D - 75 383 IPR036188 -
Spst3g03696 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 310 326 - -
Spst3g03696 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 73 92 - -
Spst3g03696 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Spst3g03696 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 337 359 - -
Spst3g03696 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Spst3g03696 395 Gene3D - 191 322 IPR036188 -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 219 243 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 312 333 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 72 94 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 214 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 110 125 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 271 287 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 176 184 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 347 365 - -
Spst3g03696 395 PRINTS Pyridine nucleotide disulphide reductase class-II signature 131 141 - -
Spst3g03696 395 SUPERFAMILY FAD/NAD(P)-binding domain 70 384 IPR036188 -
Spst3g03696 395 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 71 386 - -
Spst3g03696 395 MobiDBLite consensus disorder prediction 33 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03696 Spst-Chr3 86964656 86966784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03696 K00384 - gmx:100794363 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03696 3 86964656 86966784 Spst3g03696 3 86964656 86966784 ECH
Spst3g03696 3 86964656 86966784 Spst3g03696 3 86964656 86966784 PCT