Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03687 ATGGGGTTTCTTCAGCTACTTTCTGTAGCCTCTTTCCCGGTGATCAAAGTGTTACTGGTTACTGCTCTTGGCTTGTTTCTTGCGCTGGATAACATATCAATATTGGGAGATGATGCAAGGAAGATAGTGAATCAGCTTGTGTTTTATGTGTTTAATCCATCATTGGTGAGTACCAAGCTGGCCAAAACGATTACCTTCGAGAGTGTTGTTCAGATGTGGTTCATGCCGTTCAATATTCTTAGCACATTCTTACTGGGCTCGGCCTTGGGATGGATTTTGATCAAGATGACAAGGCCTCCCAAACAAATGGAAGGTCTAATCCTGGGTTGCTGTTCTGCTGGAAATTTGGGGAACTTGCCTATAATCATTATTCCTGCTATATGTCAAGAGAGTGGTAGTCCTTTTGGAGACTCTGATGTCTGCTATGAATATGGGATGGCTTATGCTTCACTTTCTATGGCGATTGGAGCAATTTTTATATGGTCATATGTTTACAACATAATGAGGATTTCCGCAAGTAGAATCCAAAAAGAAGACGGTACAAGCAATGGAAGCGGTATATTGAAGGCTTCAGGGGACACATCAGAGTCACATCCACACAAGTTTTCGGAAACACTTACTCCTACAAAAGACACCATGGATGATGCATATACCTTACTGCTTCCTGACGCAGAATCAGAGGAGAAAGTTTCAGTCTCAAGTAAGATTAAGAACCGCTTGAGGGTGATTTCAAGCAACTTGAATTTGAAAGTCATGTTTGCGCCATCAACCCTTGGAACTATTGCTGGATTTGTCATTGGTTTAATCTCCCCATTTCGCAATCTACTTATAGGCAGTAGTGCTCCGCTTCATGTGGTCGAAGAATCTGTTTCCATGTTGGGTGAGGCAGCCATCCCTACTCTCACACTGGTAATGGGTGCAAACCTACTTAAAGAAAATAATTATGGGGAAATGCATGGGGCAGGTTTGAAAGGATCAAGCACTCCACTGTGGACTGTTGTGGGGATTGTGGCAGTGAGATACATCTTTCTGCCACTTTTGGGTGTTGCAGTTGTGAAATCAGCCATACATCTGAGTTTGGTGCATTCAGATTCTTTGTATCAGTTCGTGCTTCTGCTTCAATATGCACTTCCCCCAGCCATGAACATAAGCACCATTGCTCAGTTGTTTGGAGCTGGTGAAAGTGAATGTTCAGTTATCTTGCTATGGACATATGCTTTCGCGTCAATTGCTGTTACTCTTTGGTCAACTTTCTTCCTGTGGCTAGTCTCATGA 1275 0.429 MGFLQLLSVASFPVIKVLLVTALGLFLALDNISILGDDARKIVNQLVFYVFNPSLVSTKLAKTITFESVVQMWFMPFNILSTFLLGSALGWILIKMTRPPKQMEGLILGCCSAGNLGNLPIIIIPAICQESGSPFGDSDVCYEYGMAYASLSMAIGAIFIWSYVYNIMRISASRIQKEDGTSNGSGILKASGDTSESHPHKFSETLTPTKDTMDDAYTLLLPDAESEEKVSVSSKIKNRLRVISSNLNLKVMFAPSTLGTIAGFVIGLISPFRNLLIGSSAPLHVVEESVSMLGEAAIPTLTLVMGANLLKENNYGEMHGAGLKGSSTPLWTVVGIVAVRYIFLPLLGVAVVKSAIHLSLVHSDSLYQFVLLLQYALPPAMNISTIAQLFGAGESECSVILLWTYAFASIAVTLWSTFFLWLVS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03687 424 PANTHER - 1 423 IPR045033 GO:0080162
Spst3g03687 424 MobiDBLite consensus disorder prediction 194 208 - -
Spst3g03687 424 MobiDBLite consensus disorder prediction 178 192 - -
Spst3g03687 424 MobiDBLite consensus disorder prediction 178 209 - -
Spst3g03687 424 Pfam Membrane transport protein 12 415 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03687 Spst-Chr3 86897795 86902096 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03687 K24139 - gmx:100817605 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03687 3 86897795 86902096 Spst3g03687 3 86897795 86902096 ECH
Spst3g03687 3 86897795 86902096 Spst3g03691 3 86917728 86924196 PCT