Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03639 ATGGTACCTTCAAGTTCTCATTTCTTAATGGGGTGGTTCAATGATGGTGACTATGTGCGTATTGATGAGTTATCTTCCACAAGGGAAGATCACACGAGGAGAATTTCTGTTCTTCCTCTAGTATTTCTCATCTTCTATGAGGTTTCTGGGGGACCCTTCGGTGTTGAGGATACCGTGCATGCAGCAGGTCCTCTATTAGCCCTTCTGGGGTTCTTGATTTTAGCAGTCATATGGAGTGTTCCCGAGGCTCTGATTACTGCAGAGATGGGTACAATGTTCCCTGAGAACAGTGGCTATGTGGTTTGGGTCTCTTCTGCTCTGGGACCCTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGATAATGCTTTGTACCCAGTTTTATTTCTTGATTATTTGAAATCAGGAATCCCTGCATTGAGTGGTGGTGTTCCCAGAACTATTTCAATTTGGGCTTTAACTGTGGTTCTCACTTGCTTGAACTATACCGGTTTAACTGTAGTGGGAACGGTTGCTGTTCTTTTAGGTGTTTTCTCACTGCTTCCTTTTGTGGTCATGGGATTCTTGTCAATTCCAGACTTGAAACCTTCAAGATGGTGCGTGACAAATCTTGATGATGTTGATTGGAATCTGTATTTAAATACTTTGTTTTGGAATCTCAATTATTGGGACTCTATTAGTACTCTTGCTGGAGAAGTGGAAAATCCAAGGAGAACTCTTCCTAAGGCTCTATTTTATGCTTTGATCCTCGTAGTTTCGGGCTATTTCTTCCCTCTTTTGATTGGGACTGGTGCTGTTCCCCTCAACAGGGAGTTGTGGACTGATGGGTACTTCTCAGATATTGCTGAGATGGTTGGAGGAGTGTGGTTGAGGTGGTGGCTTCAGGCTGCTGCTGCAATGTCAAACATGGGAATGTTTGTAGCTGAGATGAGTAGTGACTCTTTCCAGCTTCTTGGCATGGCTGAGAGGGGCATGTTACCTGAGTTCTTTGGCAAGAAGTCTCGTTATGGAACTCCTATAATAGGAATACTCTTTTCTGCCTCTGGTGTGATTTTACTCTCATGGCTGAGTTTTCAAGAGATTGTGGCTGCTGAAAATTTCTTGTACTGTTTTGGGATGATTTTAGAGTTTGTGGCATTCATATTGTTGAGGATCAAACACCCCAATGCATCTAGACCTTACAAGATTCCAGGGGGAACAGCTGGAGCAATTGCTATCTGCATTCCTCCCACAATTTTGATTTTCGTGGTGCTGGCTTTCTCCACCAACAAAGTTCTGGTTATAAGCCTCATTGCCGTACTGATTGGCCTTGTAATGCAACCTTGTCTCAAGATTCTGGAGGAAAGGAGATGGATGAAATTCTCAGTAAGTTCTGAGCTCCAGGATCTTGACAATCAAGAGAGCATTCGCTCCCTTGTGGATTAG 1440 0.4368 MVPSSSHFLMGWFNDGDYVRIDELSSTREDHTRRISVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALLGFLILAVIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALSGGVPRTISIWALTVVLTCLNYTGLTVVGTVAVLLGVFSLLPFVVMGFLSIPDLKPSRWCVTNLDDVDWNLYLNTLFWNLNYWDSISTLAGEVENPRRTLPKALFYALILVVSGYFFPLLIGTGAVPLNRELWTDGYFSDIAEMVGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFGKKSRYGTPIIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIKHPNASRPYKIPGGTAGAIAICIPPTILIFVVLAFSTNKVLVISLIAVLIGLVMQPCLKILEERRWMKFSVSSELQDLDNQESIRSLVD 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03639 479 PIRSF AA_transporter 16 464 - -
Spst3g03639 479 FunFam Amino acid permease, putative 31 460 - -
Spst3g03639 479 Pfam Amino acid permease 37 441 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst3g03639 479 Gene3D Amino acid/polyamine transporter I 29 460 - -
Spst3g03639 479 PANTHER POLYAMINE TRANSPORTER PUT1 25 471 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03639 Spst-Chr3 86403621 86405060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03639 19 471 Organic Solute Cotransporters AT1G31830 73.465 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03639 - - vra:106765956 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03639 3 86403621 86405060 Spst3g03639 3 86403621 86405060 ECH
Spst2g01133 2 10030967 10035758 Spst3g03639 3 86403621 86405060 PCT