Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03633 ATGCCCATCACCACCAAATCACAGCCCCTTTACTTTGCCCAAAGTCTCTCAGGAATCCTTCATTTCTTAATCTTCTTATTCCCTTCTCAAGCCACTACTCATCATCTCATTCACCGCGATTCCCCTTTATCTCCCTTCTACGACCCTTCAAGCACCCACTTTGATCGTTTGCACAATGCTTTCCAACGTTCGTTCAAGCGCATCAACCATTTCAAAGTTGCTGCTGCTAACCCTAACCATGGCACCATACAGGTCCCTATGAAACCTGGAGGTGGAGAGTATCTCATGAAGATTTCCTTTGGAACTCCACCTGTTGAGGTAATTGGCATAGCTGACACTGGTAGTAACCTTATCTGGACACAATGTTTGCCATGCATACAATGTTATAACCAAACTATTCCTCTCTTTGACCCTCGTCATTCCAAATCATACCACACAGTACCATGCCAATCCAAAGTTTGTAACAGTACAACAGATTCAGAAAATGCAAAATGTCAGAATAAGACCACATGTGACTATAGTTATTCTTATGCAGATGGTTCTCACACTGCTGGCAACCTTGCTTTTGAAACCCTAACCTTAGGCATAAGCAACCCAATTTCTCTTCCAAATGTTGTATTTGGTTGTGCACACGACACTGCTGGCATATTTGATGCATCAGGGTCAGGCATAATCGGTCTTGGTAGTGGCAAACTTTCACTGATTTCTCAAATGGCTACTCATTTACCCGGTGGCAAAAAATTCTCCTATTGTCTAATTCCCACTACCATGAACAAGAACTCCACAAGCAAAATTAATTTTGGAAACGATTCTTTGGTTTCTGGTCCTCAAGTCGTTAGAACTCCTCTTATTATAGCAGATCAGGGTCTGTTTTCACTCACATTGGAGGCCTTCAGTGTAGGAAAAGAGAGGATTAAATTTCCACCCACGGGTGACACAACGACTGTTCCTAATACCGAAGGAAATGTGATCATTGATACTGGGACAACATTTACTCTTTTGCCAAGTGATGTGTATACTGGTTTGGTAAATGCTTTAAGTAAAGTTATAAAGGCTAAAAGGGTGAGTGACCCCAACGGTGATCTTCACCTTTGTTATGAAAGCAATGGCGATGACATGAAGCTTCCCATTATCACAGCACATTTTAAGGGTGGAGATGTGAATTTGCAGCCAGTGAATACGTTCTCTTGGGTGAAGAAGGATGTGGTATGTTTAACAATGGTTTCAGATGATGACGTAAGTCTCATGGGAAACTTGGCTCAGACCAATTTCTTAGTAGGATATGACCTTGAGGCTCGCACTTTGTCCTTTTTGCCAACTGAATGTGCCAAGTGA 1335 0.4217 MPITTKSQPLYFAQSLSGILHFLIFLFPSQATTHHLIHRDSPLSPFYDPSSTHFDRLHNAFQRSFKRINHFKVAAANPNHGTIQVPMKPGGGEYLMKISFGTPPVEVIGIADTGSNLIWTQCLPCIQCYNQTIPLFDPRHSKSYHTVPCQSKVCNSTTDSENAKCQNKTTCDYSYSYADGSHTAGNLAFETLTLGISNPISLPNVVFGCAHDTAGIFDASGSGIIGLGSGKLSLISQMATHLPGGKKFSYCLIPTTMNKNSTSKINFGNDSLVSGPQVVRTPLIIADQGLFSLTLEAFSVGKERIKFPPTGDTTTVPNTEGNVIIDTGTTFTLLPSDVYTGLVNALSKVIKAKRVSDPNGDLHLCYESNGDDMKLPIITAHFKGGDVNLQPVNTFSWVKKDVVCLTMVSDDDVSLMGNLAQTNFLVGYDLEARTLSFLPTECAK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03633 444 Gene3D Acid Proteases 70 267 IPR021109 -
Spst3g03633 444 Pfam Xylanase inhibitor C-terminal 292 437 IPR032799 -
Spst3g03633 444 CDD pepsin_A_like_plant 93 442 IPR034161 -
Spst3g03633 444 Pfam Xylanase inhibitor N-terminal 94 269 IPR032861 -
Spst3g03633 444 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 323 334 IPR001969 GO:0004190|GO:0006508
Spst3g03633 444 SUPERFAMILY Acid proteases 87 442 IPR021109 -
Spst3g03633 444 Gene3D Acid Proteases 268 444 IPR021109 -
Spst3g03633 444 FunFam Probable aspartic protease At2g35615 73 268 - -
Spst3g03633 444 ProSiteProfiles Peptidase family A1 domain profile. 94 438 IPR033121 -
Spst3g03633 444 FunFam Aspartic proteinase CDR1 270 444 - -
Spst3g03633 444 PANTHER OS07G0603500 PROTEIN-RELATED 35 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03633 Spst-Chr3 86373108 86374442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03633 92 444 Miscellaneous Gene Families AT1G44130 25.199 4.71e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03633 - - var:108339148 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03633 3 86373108 86374442 Spst3g03633 3 86373108 86374442 ECH