Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03632 ATGGTCATCACTTCCAAATCACAGTCCCTTAACTTTACTCTAAGTCTCTTTGGAATCCTTCATTTCTTAATCTTCTTAACACCCTCGCAAGCCACCACTCATCGTCTCATTCACCGCGATTCCCCTTTATCTCCCTTCTACCACCCCACAACCACCCCCTCTCATCGCCTCCACAATGCTTTCCAACGCTCATTGAACCGCATCAACAGTTTCAAACTTGCTGTAGCTAACCCTAACAATGGCAACACACAAGCCCCTGTGAAACCAGGTGGTGGTGAATACCTCATGACAATTTTCATTGGAACTCCACCAGTGCAGGTAATTGGCATAGCTGACACAGGTAGTGACCTCATATGGACACAATGTCTGCCATGCATACATTGTTACCCCCAAACTATTCCTCTCTTCAATCCTCAGCATTCCAAATCGTACAACACACTACCGTGCCGATCTACATTTTGCAACCCAAGATATGTTGATCATCCTCGATGTGGCATTAATAGCACATGTTGGTATCGTTATTCTTATTTCGATGGTTCTCACACTGCGGGAAACCTTGCCTCTGAAACCTTCACCTTAGGCACCACAAACCCTATTTCACTTCCAAATACTCTATTCGGGTGTGCACACGACACTACTGGCATTTTTGATAAGTCAGGGTCAGGCATCATTGGTCTTGGTCGGGGAAGGTTTTCACTAATTTCTCAACTAAATGGTTCCAAAATGTTCTCTTATTGTCTAACTCCCAATACCTTAAACTCCACTAGCAAGCTTAGTTTCGGTGAAGATTCTGTGGTTTCTGGTCCTGAAGTTGTCACAACTCCTTTTGTTACCACTGGTACTTCTACTTCATACCACATCACAGTGGAGGCTTTAAGTGTTGGGAAAACGAGGATTCCGTTTGTGAACAAGAGTGGCATTGAAGGAAATGTGATCATTGATTCTGGGACAACCTATACTTTTCTGCCATTAGGTGTTTATAATGGTTTGGTATCTGCTTTGAATAACATAATAAGGGCTAAAAAGGGGCGTGACCCCAACGGTATTCTTACCCTTTGTTATCAGACTACTGCTGACAAAATCAGGCTTCCCATTATCACAGCACATTTTAAGGGAGGGGATGTGAAGTTACAGCCAGTGAATACATTCTCTTGGGTGAGGAAGGATGTGGTATGTTTGACAATGATTCACAATGACAATACAGTTTTTGGAAACATGGCTCAGACGAATTTCTTAGTAGGATTTGACCTTGAGGCTAGTACTGTGTCCTTTAAGCCCACTGATTGTTCCCTTCAATAA 1299 0.4311 MVITSKSQSLNFTLSLFGILHFLIFLTPSQATTHRLIHRDSPLSPFYHPTTTPSHRLHNAFQRSLNRINSFKLAVANPNNGNTQAPVKPGGGEYLMTIFIGTPPVQVIGIADTGSDLIWTQCLPCIHCYPQTIPLFNPQHSKSYNTLPCRSTFCNPRYVDHPRCGINSTCWYRYSYFDGSHTAGNLASETFTLGTTNPISLPNTLFGCAHDTTGIFDKSGSGIIGLGRGRFSLISQLNGSKMFSYCLTPNTLNSTSKLSFGEDSVVSGPEVVTTPFVTTGTSTSYHITVEALSVGKTRIPFVNKSGIEGNVIIDSGTTYTFLPLGVYNGLVSALNNIIRAKKGRDPNGILTLCYQTTADKIRLPIITAHFKGGDVKLQPVNTFSWVRKDVVCLTMIHNDNTVFGNMAQTNFLVGFDLEASTVSFKPTDCSLQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03632 432 SUPERFAMILY Acid proteases 89 430 IPR021109 -
Spst3g03632 432 FunFam Probable aspartic protease At2g35615 74 261 - -
Spst3g03632 432 Gene3D Acid Proteases 266 431 IPR021109 -
Spst3g03632 432 FunFam Aspartic proteinase CDR1 263 432 - -
Spst3g03632 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Spst3g03632 432 Pfam Xylanase inhibitor C-terminal 285 425 IPR032799 -
Spst3g03632 432 CDD pepsin_A_like_plant 93 429 IPR034161 -
Spst3g03632 432 Gene3D Acid Proteases 74 262 IPR021109 -
Spst3g03632 432 ProSiteProfiles Peptidase family A1 domain profile. 94 425 IPR033121 -
Spst3g03632 432 Pfam Xylanase inhibitor N-terminal 94 261 IPR032861 -
Spst3g03632 432 PANTHER OS07G0603500 PROTEIN-RELATED 34 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03632 Spst-Chr3 86369447 86370745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03632 92 430 Miscellaneous Gene Families AT1G77480 26.287 2.57e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03632 - - var:108339148 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03632 3 86369447 86370745 Spst3g03632 3 86369447 86370745 ECH