Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03630 ATGCCCATATCCTCAGAACTCCCTGAGGAAATGGCCCTCACCACCAAGTCCAGAAAATCCAATTCACCTTCAAATTTTTACTTTTGCACCACTCTTTTCTTCGTTGTCCTCTTCACCATACCTGTTTTTTTCCTCCTCCATACCCCAACCACCACCTCCATATGCAACACCCTTGCCTCCTCCCAAGCTGAAACTTGGTCGGGTGATCTTCAGTTGGTTGAATTTGCATGGAACCGCCTCTCATTTTTTGAGCACAAACCACCACCCTTTGCTCTCAAAATTGCAGTCTTCTCCAGGAAGTGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGCCATGCCCACACCCTTCACACTGCTTTAGCACGACGTGGCCATCAAGTTCATATCTTCACATCTCCACCCCAAGATGAAAGCACTTCAATCTCATCCTCAGAGGTAAACAAAAACCACCATCAAGAAGGTGGACCTTCTTCCCCTTACATCCATTTCCATGAAGGTGAGCCTGGCAGGTGGCGTTATAACAAGGCATGGGAGCAGTTTGTGGAAGAAAACCAGAGAGAACCATTTGATGTTGTGCACTCGGAAAGTGTGGCACTCCCTCATTGGCTAGCACGCAACATGTCAAACCTTGCAGTGTCTTGGCATGGCATAGCCCTGGAGAGCTTGCAATCGAGCATTTTCCAGGACTTGGCTCGCCAGCCAGATGAGCCCATGTCCCCTCTTTTCAACAAAAGTATACAGGGTGTTGTGCCAAAGGTGCTGACTGAGATAAGGTTCTTCAGGAATTATGCCCATCATGTTGCCATTAGTGATAGTTGTGGTGAGATGCTCAGGGATGTGTACCAAATTCCTAAAAGAAGAGTTCATGTAATACTAAATGGTGTTGATGAGGATGACTTTAGAGAAGATGTAGAATTGGGAAGGGAATTCAGAAAAAAAATTGGTATTCCTGGGAATGCAAGTTTGGTACTTGGTGTTGCTGGAAGATTAGTGAAGGACAAAGGCCATCCTCTGCTTCATGAAGCTTACTCGAGACTTATAACCAAGTACCATGATGTGTACTTGGTTGTTGCTGGTTCTGGACCATGGGGGAACAGGTACAGGGATTTAGGGGACCAGGTTCTTGTTCTGGGATCGATGAGTCCATCCATGTTAAGAGCGTTCTACAATGCAATTGACATTTTTGTCAATCCCACACTCAGACCACAAGGGCTTGACCTTACACTGATGGAGGCAATGATGAGTGGGAAACCTCTTTTGGCATCAAGATTTCCAAGCATTCAAGGGACTATTGTGGTTGATGATGAATATGGTTACATGTTTTCCCCTAATGTGGAGTCCCTGTTGGAGGCACTGGAAGCAGTAGTAACGGAAGGACCGCAGAGGCTAGCAAGGAGGGGCAAGGCATGCCGGGTATATGCTGCCAAAATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTCTTGTGTATAAAAAATCGCACATTCTGTACCTATCCTTGA 1515 0.4627 MPISSELPEEMALTTKSRKSNSPSNFYFCTTLFFVVLFTIPVFFLLHTPTTTSICNTLASSQAETWSGDLQLVEFAWNRLSFFEHKPPPFALKIAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQVHIFTSPPQDESTSISSSEVNKNHHQEGGPSSPYIHFHEGEPGRWRYNKAWEQFVEENQREPFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLARQPDEPMSPLFNKSIQGVVPKVLTEIRFFRNYAHHVAISDSCGEMLRDVYQIPKRRVHVILNGVDEDDFREDVELGREFRKKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKYHDVYLVVAGSGPWGNRYRDLGDQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIQGTIVVDDEYGYMFSPNVESLLEALEAVVTEGPQRLARRGKACRVYAAKMFTARKMALAYERLFLCIKNRTFCTYP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03630 504 Gene3D Glycogen Phosphorylase B; 92 304 - -
Spst3g03630 504 MobiDBLite consensus disorder prediction 1 21 - -
Spst3g03630 504 MobiDBLite consensus disorder prediction 133 155 - -
Spst3g03630 504 CDD GT4_PimA-like 93 492 - -
Spst3g03630 504 Pfam Glycosyl transferases group 1 312 469 IPR001296 GO:0016757
Spst3g03630 504 PANTHER GLYCOSYLTRANSFERASE 25 504 - -
Spst3g03630 504 Gene3D Glycogen Phosphorylase B; 305 475 - -
Spst3g03630 504 MobiDBLite consensus disorder prediction 133 162 - -
Spst3g03630 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 492 - -
Spst3g03630 504 Pfam Glycosyltransferase Family 4 108 299 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03630 Spst-Chr3 86361735 86363249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03630 11 504 Glycosyltransferase AT4G19460 64.471 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03630 - - aprc:113860121 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03630 3 86361735 86363249 Spst3g03630 3 86361735 86363249 ECH
Spst2g01107 2 9746935 9748398 Spst3g03630 3 86361735 86363249 PCT