Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03621 ATGGCCAAAACCATGCCGAAATTCAAGGGAAAACTGGTGATGGGTGCGAATGGGCGCACCAACCCTTTGGTGTGGCTTGTAGCCATTATCTGCACCGTCATAGCAGTAGCAGTGGTACTTGTAGGCGTTGCAGTGTTCATTGGGTACATGGTGATCCACCCTAGAGTGCCTGTGATCAGTGTCACTAATGCTCACCTTGACCTTTTCAGAAATGACTATGCTGGTTTGCTCCAGACCCAACTCACTATTATTGTGACTGCAAAGAATGGGAATGCCAAGGCTCATGCAACCTTCTCTGGCATCACCTTCAACATCAGCTACCAAGGGCAGGACATAGCTGTGCTTGTTGCAGACCCTTTTGAGGTTCCAAAGAACAGCTCAAAGGACCTCAGCTATGTTGTTCAGTCATCATCCATACCATTGAGTCCTGATCAAATGGAGGAAGTGGGTAATGCGTGGAAAAAGAATGAGGTTGAGTTTGATTTCAAAGGGGCTGCAAGGACTCAGTGGAGGGTAGGACCTTTAGGGTCGCTCAAGTTCTTGTGCCATCTAGATTGTGACCTCAAGTTCCAACCCTTCAATGGGACTTACATACCCTCCCGCTGCACCTCCAAATCACATTGA 624 0.4808 MAKTMPKFKGKLVMGANGRTNPLVWLVAIICTVIAVAVVLVGVAVFIGYMVIHPRVPVISVTNAHLDLFRNDYAGLLQTQLTIIVTAKNGNAKAHATFSGITFNISYQGQDIAVLVADPFEVPKNSSKDLSYVVQSSSIPLSPDQMEEVGNAWKKNEVEFDFKGAARTQWRVGPLGSLKFLCHLDCDLKFQPFNGTYIPSRCTSKSH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03621 207 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 27 204 - -
Spst3g03621 207 Pfam Late embryogenesis abundant protein 85 172 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03621 Spst-Chr3 86288843 86289466 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03621 - - gmx:100797168 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01076 2 9501474 9502154 Spst3g03621 3 86288843 86289466 PCT