Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03617 ATGAACAGAAAAAGTATGGAGAACAATGGGGAAAGCCATAGCAGAAATGGTAGTTTCAGGATGGGGTTTGGGTTGGGTGCGAACGAGGCAAAAGTTCACACCGTGCTTGAGCTTGGTTCTGTTGATACACACACTACTCTTCTTCTAGACGATGGAGATGTTGGTGATGGTGAGGGTGAGGAGAGAGAGAAACAGCAAAAACCTCTCACCAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTAGTTGCTCTCTGCGACACCATCATACCTTCCGTCCACAACAACGTTGTTGGCTCCTCCGATGAGTCTGTCGCCAACTTCTACAAGACTTCAGCTTCCATGGCTGGAACACCTGAGCATCTTGGGACAGTGATAAGTGAGAAACTGAAGCACCCAAGTACATGGCTGTTGCAATTGACATTGTGGCTATTGTCTACATGGTTTGGCACATTGATTCTGTGTGGCATGGCGAGTCTCTCAACAAGCTTTCCCTTCTTCCATAGCTACCCTGAAATGTCTCTGTTCAAACGCCAAAGAGTTATGCAGAACTGGTCTCTGAGTTACCTTCGTCCCCTTCGGATGTTCTTCAGGACCATCAAGCTTCTCACTCTCCTTGTCTTCTTCACTCAGGGTAGAGAGATTCAGAGTGAAGGGCACAAAGGTGTTTCACCCATAATTGTACATTTGAATAGCATGTGCATTATCCAAATTAATGTCCAAGTGGTGACTTACAGCTCGGACATTCAATCCAACCGTACCTTAGTGGATGAAGCACAAGAAAACCCATCATGGAAGGCAATTGGCTATTGTGGACCTGATCCAGAGTTCAAAGCACAGCTAAAAAACCACTTCTTAAATAGAACCTCAAAGGAAGAAGAACATGAAGAAAGAGATGATGATACTGAAGAGGTCAGAGGCCCTCTTCACAAAGGTCTTGTTCATTTAAATTACCCCCGACACATCATTACAGATTCCCTAAGACGATTTGGATTCTCTGTCTCTACAACTCCTAAAAAGATCAAGGTTTCTAACCTGTCATCACCTTCTTTAGTTATCCAATGTGATGCAGTGGTTGTCGGTTCTGGCTCTGGGGGTGGGGTGGTAGCTGGAGTTCTAGCAAATGCTGGTTATAAAGTGCTGGTCTTGGAGAAAGGAAGCTATTTTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCTAGCATAGATCAAATGTACCTCTCCAATGGTTTGGTTGCAACAACGGATATGTCTGTCTTAATACTAGCAGGATCCACTGTTGGTGGAGGGTCTGCAGTCAACTGGTCGGCCAGCATTAAAACTCCTCAACATGTATGCAAGGAGTGGTGTGATCGCCATGAACTAGAACTGTTTGAAAGTAAGTTGTACAAAGAAGCCATGGATGCTGTGTGTGACAAAATGGGAGTCCAATCTGAGATTGAAGAGGAAGGGTTCAACAATGAAGTCCTGAGAAGAGGGTGTCTAGAAATGGGATATCCTGTGTGCAACATTCCTAGGAATGCTTCGTCAAATCACTACTGCGGTTGGTGCTGCATGGGATGTAAGGATGGAAAGAAGAAGAGTACATCAGAAACATGGTTAGTGGACTTGGTGAAATCAGGTAATGGCGCTATCATTCCAAGTTGTGAGGCCATACAAGTCTTGCACAAGAAAAAGAAAGGAAGTGATAGAAACATAGCCCGTGGAGTGGCTTTTGCAATTGAATACAAGGGAAAAAAAGACATTGGTGTTGTGGAGTCCAAGGTCACAATTGTAGCCTGTGGAGCACTCAGTACTCCAGCATTGCTTAAGAGAAGTGGCTTGAAGAATGAGAACATAGGAAGAAACTTGCACCTTCATCCAGTGGCAATGGCCTGGGGATACTTCCCCGATTCATCTTCACCTGATACGTGGCCAGAGAAACATAAGAAGAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGCTGCACAGTTTGACAAATCTGGATATGGTGCAGTGGTCCAAACACCAGCATTGCATCCTGGTATGTTCTCCATTCTAATGCCATGGACCTCTGGCAAAGATATGAAAGATCGAATGCTCAAATTTTCAAGAACAGCTCATGTATTTGCTCTGGCAAGAGATCAAGGATCAGGAACAGTGAATTCACCCTCCCTTATAAGTTATCAGTTGAAAGATGTGGACAAAGATAATTTAAATATAGGAATTGAGAAGGTGCTGAGAATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACCCATAATAACAAGGGAAGGAGCATAAATGTTAAGCAGGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGTTCAGTGTCTTTAACAGACCTTGCAACACCATTGTGTTCAGCACATCAGATGGGAAGTTGTAAGATGGGTACTAATCCAAGTGACTCAGTTGTGAACCAAATGGGAGAGACATGGGAGGTGGAGGGCCTTTTTTTGGCAGACACAAGTGTCTTTCCCACAGCTTTGGGGGTGAATCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACAGCACAATCTGTTGTTGAAGTTCTTAGAAGGAAAATAAAGTGA 2595 0.4416 MNRKSMENNGESHSRNGSFRMGFGLGANEAKVHTVLELGSVDTHTTLLLDDGDVGDGEGEEREKQQKPLTNSLSPRQMKSLVALCDTIIPSVHNNVVGSSDESVANFYKTSASMAGTPEHLGTVISEKLKHPSTWLLQLTLWLLSTWFGTLILCGMASLSTSFPFFHSYPEMSLFKRQRVMQNWSLSYLRPLRMFFRTIKLLTLLVFFTQGREIQSEGHKGVSPIIVHLNSMCIIQINVQVVTYSSDIQSNRTLVDEAQENPSWKAIGYCGPDPEFKAQLKNHFLNRTSKEEEHEERDDDTEEVRGPLHKGLVHLNYPRHIITDSLRRFGFSVSTTPKKIKVSNLSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYFARNNLSLLEGPSIDQMYLSNGLVATTDMSVLILAGSTVGGGSAVNWSASIKTPQHVCKEWCDRHELELFESKLYKEAMDAVCDKMGVQSEIEEEGFNNEVLRRGCLEMGYPVCNIPRNASSNHYCGWCCMGCKDGKKKSTSETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGSDRNIARGVAFAIEYKGKKDIGVVESKVTIVACGALSTPALLKRSGLKNENIGRNLHLHPVAMAWGYFPDSSSPDTWPEKHKKSYEGGIMTAMSTVAAQFDKSGYGAVVQTPALHPGMFSILMPWTSGKDMKDRMLKFSRTAHVFALARDQGSGTVNSPSLISYQLKDVDKDNLNIGIEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESSVSLTDLATPLCSAHQMGSCKMGTNPSDSVVNQMGETWEVEGLFLADTSVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKIK 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03617 864 Pfam GMC oxidoreductase 355 621 IPR000172 GO:0016614|GO:0050660
Spst3g03617 864 Gene3D - 783 863 IPR036188 -
Spst3g03617 864 SUPERFAMILY FAD/NAD(P)-binding domain 352 856 IPR036188 -
Spst3g03617 864 MobiDBLite consensus disorder prediction 47 72 - -
Spst3g03617 864 Pfam GMC oxidoreductase 722 850 IPR007867 GO:0016614
Spst3g03617 864 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 253 862 - -
Spst3g03617 864 Gene3D - 340 671 IPR036188 -
Spst3g03617 864 PIRSF Lg_Ch_AO 60 220 IPR012400 GO:0046577
Spst3g03617 864 PIRSF Lg_Ch_AO 229 864 IPR012400 GO:0046577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03617 Spst-Chr3 86246359 86252924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03617 53 859 Acyl Lipid Metabolism Gene Families AT4G19380 55.198 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03617 K17756 - gmx:100778575 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03617 3 86246359 86252924 Spst3g03617 3 86246359 86252924 ECH
Spst2g01073 2 9456065 9463942 Spst3g03617 3 86246359 86252924 PCT