Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03616 ATGCCTCTTCTTCATACAAACAACCACCTCACCATGGAAAACCCTCCTAGATTCAAATTTACACCCATCTTCTTCATCATCATTTCCCTCTCCCTTGGCTTAATTTCATTTGTCTTGTGTGTAGCAGCCGAGATAAAGAGAAATAAGGAGAAGGATCTCAGGTGGAATGGGAAGCTGTGTTATTTGCCATCAAGCAAGGCCTTTGGATTGGGAATAGCAGCTTTGGTTAGTTTCTTTCTTGCCCAGATGATTGGGAATTCTATATTAATATTAAGGAATTGTTGTTGGAGAAGAAAAAGTACATCCCAGTACAAGATGCCTGCTGTTGCAAAGGTTCTGGTTTTGATATCTTGGGTGAGCTTTGGACTTGCAGCTATTTTACTGATTGTAGCCACAAGCATGAACAGAAGACAGGCATATAGGGTAGGGTGGTTGAATGGTGACTGCTACCTAGTCAAGGGAGGAACTTATGCTGGTTCAGCCATATTGGTCCTAGTCACAGTGTGTTCTGTAAATGGTTCGGCTTTCTCAACAATAAAATCCACCCAAGCAAAGCAGCATACAAAAGTACAAAAGACAATGGGGTGA 588 0.4184 MPLLHTNNHLTMENPPRFKFTPIFFIIISLSLGLISFVLCVAAEIKRNKEKDLRWNGKLCYLPSSKAFGLGIAALVSFFLAQMIGNSILILRNCCWRRKSTSQYKMPAVAKVLVLISWVSFGLAAILLIVATSMNRRQAYRVGWLNGDCYLVKGGTYAGSAILVLVTVCSVNGSAFSTIKSTQAKQHTKVQKTMG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03616 195 PANTHER OS07G0462200 PROTEIN-RELATED 26 178 - -
Spst3g03616 195 Pfam Protein of unknown function (DUF1218) 74 168 IPR009606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03616 Spst-Chr3 86237509 86238645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03616 - - var:108339669 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03616 3 86237509 86238645 Spst3g03616 3 86237509 86238645 ECH
Spst2g01072 2 9452128 9453326 Spst3g03616 3 86237509 86238645 PCT