Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03590 ATGGACAACAAAGATGGAATACCAGTCACTCGGCCGGACAAAAGCAAGATTGTCCCTATGACAATCCTATTTGTGGTGCTATGTGGATTTTCTTTCTATATGGGTATAATATTTTGTTCTGAGGACAGATTTTTGTCAATATATGGCCAGATATCCATTAAGTCCCCCAAGAAGTCATCAATAACTCCTCTGCAAATTAAATACATTAGTTTTCCAGAATGCAGCATTGACTTTCAAGATTATACTCCATGCACAGATCCAAGTAGATGGAAGAAGTACATCTCCCGTCAGCCTACTTTGTTGGAACGCCATTGCCCTCCAAAATCTAAGAGGAAAGAATGCTTAATTCCTCTCCCCGATGGTTATAAGCCTCCAATTAGATGGCCAAAGAGCAGAGATGAATGTTGGTACAGCAATGTTCCGAATGAGTGGATTAACAAGCAGAAGTCCGATCAGCATTGGTTGAAAAGGGAAGGCGAGAAATTCATATTTCCTGGTGGGGGTACTATGTTCCCAAATGGTGTTGGTAAATATGTTGATTTAATGCAAGATCTGATCCCAGAAATGAAAGATGGGACCATTCGAACTGCCATTGATACAGGCTGTGGGGTTGCTAGCTGGGGTGGTAGCTTGCTGGATCGTGGGATTCTAACTCTCTCTCTCGCACCAAGAGATAACCATCGAGCCCAGGTTCAATTTGCTCTAGAGCGTGGTATCCCTGCAATTCTTGGTGTCATTTCTACACAGAGACTTCCATTTCCATCAAACTCCTTTGATATGGCTCATTGCTCCAGATGTCTAATCCCATGGACAGAATTTGGTGGTATTTATCTCCTTGAAATACACCGGATTGTTCGTCCTGGAGGATTTTGGGTCTTGTCTGGTCCACCAATAAATTACAAGCGCAGGTGGCGTGGATGGAATTCAACTCTTGAAGCACAAATATCAGGCTATGAGAAGTTGCAGGATTTGCTGACTTCAATGTGCTTTAAAATGTTCAAGGAAAAGGGTGACATTGCTGTATGGCAGAAGTCTCAAGATAACAATTGCTACAGTAAGGGAGTTAGAGATACCTATCCTCCTAAATGTGATGACGGCACTGAACCAGATTCAGCTTGGTATACTCCAAGTCGTGCCTGTATTGTGGTTCCAGATCGTAAGTTTAAGAAATTAGGTCTGTCATCCATTTCTAAGTGGCCTGAGCGGTTGCATATTCCACCAGAACGTATTTCAATGGTTCATCGTGGGACTGCTAAAGCTTTCAAACGTGATGACAGTAAATGGATTAAGCAGACTGCGTACTATAAGAAGTTAATCCCTGACCTTGGGACAGACAAGATAAGAAATGTAATGGACATGAACACAGCATATGGAGGTTTTGCTGCAGCCTTGATCAATGATCCTGTATGGGTCATGAATGTGGTCTCATCTTATGCTACTAATACACTCCCCGTGGTTTTTGATCGAGGTCTTATTGGAACATTTCACGACTGGTAA 1497 0.4242 MDNKDGIPVTRPDKSKIVPMTILFVVLCGFSFYMGIIFCSEDRFLSIYGQISIKSPKKSSITPLQIKYISFPECSIDFQDYTPCTDPSRWKKYISRQPTLLERHCPPKSKRKECLIPLPDGYKPPIRWPKSRDECWYSNVPNEWINKQKSDQHWLKREGEKFIFPGGGTMFPNGVGKYVDLMQDLIPEMKDGTIRTAIDTGCGVASWGGSLLDRGILTLSLAPRDNHRAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLLEIHRIVRPGGFWVLSGPPINYKRRWRGWNSTLEAQISGYEKLQDLLTSMCFKMFKEKGDIAVWQKSQDNNCYSKGVRDTYPPKCDDGTEPDSAWYTPSRACIVVPDRKFKKLGLSSISKWPERLHIPPERISMVHRGTAKAFKRDDSKWIKQTAYYKKLIPDLGTDKIRNVMDMNTAYGGFAAALINDPVWVMNVVSSYATNTLPVVFDRGLIGTFHDW 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03590 498 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 57 498 IPR004159 GO:0008168
Spst3g03590 498 FunFam probable methyltransferase PMT21 169 347 - -
Spst3g03590 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 319 IPR029063 -
Spst3g03590 498 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 80 498 IPR004159 GO:0008168
Spst3g03590 498 Gene3D Vaccinia Virus protein VP39 170 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03590 Spst-Chr3 85934312 85936767 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03590 - - pvu:PHAVU_003G280000g 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01147 2 10131296 10133878 Spst3g03590 3 85934312 85936767 PCT