Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03490 ATGAGTACCGAAAAGACTCCTTCATCAGTTTCATCTTCTTCGAGTAACTACGAGGTGTGCAAGGGATTCAATGGCCTTGACAAGGTTCTTCTTCGCGACGCTCGTGGAAGCTCCGCTGAGGTGTACTTGTACGGTGGTCACGTGACTTCTTGGAAGAATGACCAAGCCGAGGAATTACTTTTTCTCAGCAGCAAGGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATCCCAATATGTTTTCCTCAATTTGCAAACCTTGGTACTCTTGACTCACATGGATTTGCTAGAAACCGGTTCTGGACCATTGATGATAATCCTCCACCTTTTCCAACAAATACTTTGAGTAAAGCCTATGTTGATTTGATTCTTAAACCCTCGGAAGACGACATCAAGATTTGGCCTCACAGTTTTGAGTTTCGTCTCAGAGTAGCTCTTGGACCTGGAGGAGAGCTAATGTTGACATCTCGGATCAGGAACACTAACATTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCAGATATAAGTGAAGTGCGGGTAGAGGGGTTAGAGACATTGGATTATCTTGACAACTTACAGAAAAAGGAACGCTTTACTGAACAGGGTGATGCTTTAACATTTGAATCAGAAGTTGACAGGATATATCTCAGCACTCCTACAAAGATTGCAATTCTTGATCATGAGAAGAAGAGAACATTTGTGTTACGTAAAGATGGTCTCCCCGATTCTGTGGTATGGAATCCTTGGGATAAGAAAGCAAAGGCTATGACTGATTTCGGTGATGACGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAATCCTATTACTTTGAAACCTGGCGAGGAATGGAAGGGAAGACTAGAACTTTCAACTGTTCCTTCTAGTTATTTTAGTGGACAGCTTGATCCCCAAAGAGTTATTCAAGGAAGCTGA 972 0.4208 MSTEKTPSSVSSSSSNYEVCKGFNGLDKVLLRDARGSSAEVYLYGGHVTSWKNDQAEELLFLSSKAIFKPPKAIRGGIPICFPQFANLGTLDSHGFARNRFWTIDDNPPPFPTNTLSKAYVDLILKPSEDDIKIWPHSFEFRLRVALGPGGELMLTSRIRNTNIDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQKKERFTEQGDALTFESEVDRIYLSTPTKIAILDHEKKRTFVLRKDGLPDSVVWNPWDKKAKAMTDFGDDEYKHMLCVEAAAIENPITLKPGEEWKGRLELSTVPSSYFSGQLDPQRVIQGS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03490 323 SUPERFAMILY Galactose mutarotase-like 21 302 IPR011013 GO:0003824|GO:0005975|GO:0030246
Spst3g03490 323 Pfam Aldose 1-epimerase 27 302 IPR008183 GO:0005975|GO:0016853
Spst3g03490 323 Gene3D - 24 309 IPR014718 GO:0030246
Spst3g03490 323 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 21 308 - -
Spst3g03490 323 CDD D-hex-6-P-epi_like 33 303 IPR025532 -
Spst3g03490 323 FunFam Glucose-6-phosphate 1-epimerase 24 309 - -
Spst3g03490 323 PIRSF PHexose_mutarotase 8 309 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03490 Spst-Chr3 84736251 84740831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03490 K01792 - gmx:100801977 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03490 3 84736251 84740831 Spst9g02950 9 63637050 63642187 PCT