Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03448 ATGGAAAAGCAAGTCATGGGCGAATTTGTACGTGTTCTGAAACTTACCAGGACTGTGAGCGTTCCGCTTCAGTTGCTGCAAACAGCTAAATGGTTGTCTTCAAAACCATTGGTTAGCGGGTCTGATGTTCTTGACATTAGAATTGTAAAGGAGACCATATTTGAGTGGGGTTTCCTAGCTGTTTGCTCTCGAGTGGATGAGGTTGTTTCATTTCCGCTGTATGTTGAGGCCATACGCTTTGCTTTTCATGAAGAGAGCATGGTTCGCACTGCAGTACGTGCTGTGACCCTTAATGTCTATCATGTTGGAGATGACTCTGTCAATAGATATATAACCAGCATTCCTCACAAAGATTACTTCTCAAACCTGATTTCATTTTTTAGGAAGCAGAGCATGGATTTAAATAAACGGCTTTCTGTTACACAGCTAAATCCGGGCCCAGATGCAATCTCTGCAATTATTGCTGCAGTAGATGAAATTGAGGATAATCTGTACTACTTCAGTGATGTTGTGTCTTCTGGAATTCCTGATGTTGGGAGGCTAATTACAGATGGCATTATGATGATTTTGATATTTCCATTACTTCTTCCTTCCCTGAGGGTCTTGCCTAATAATGACATGCAAGATGGTGTTGTCCCTTCTTTGTACTTACTTTGTTGCATCCTGAGGATTGTCAAAATCAAAGATTTGGCAAATACCATAGCTGCTGCTCTTTTTTATCCCTTAGAGGCCTTTACAAAGAGTTCTTGGGGTAAATTTGATTGCTTTATATCTGATCATGGTTTTGATTCAGATGCTGTTCTAGTGCAAAATGATTGTACCAGTTCAAATTTGTCATTAAGGGAGGTTTTGCTTGCATATATAACAAAAGGAAATGATATCTTGGTTTTGGGTTCTTTGAGTGTTCTTGCTATTCTGCTGCAAACTAAAGAACTTGACGAATCAATGCTCTATTGGCTTGGAATTCTTCCACAACGGAAACAACATAAGAAACTGTTATTGCAAGCTTTAGTTGGTGAGGGTTCAGGTGAAGAACAACTTTTTTCATCCAAAAGTAGCTTGACTAGGGATGGCATTGGTACTGATGTCAATGTATATCATAACAAGATCAAGGAGCAGTATGGAGTATCTTTTCTGCCTTCTAATGTGGTAATAAGTCCTCATGTACATAGATTTCAGGTCATTGATGCATTAGTAAACCTCTGTTGTCGTCCTAATATATCTGCAGAGATACTGTGGGATGGTGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGTGTCAGAATTCAACAGCAATCACCTTGAATTACTGAAAGTATCGTACAATAATTATGCTTCAGCTCTTGTAGAGGAGGTTAGAGGTATTTGGTCCGACTTCCTTATTTCTGTTCTCTGTGATGAATGGAGAAAGTGCAAGAGAGCAATGGAGTCTTCATCTCCTCGGAAAGAACCAAGTTGCGTACTTTTGCTACTGTGGAAGATTGCTTCAGACGGTTATATTACAGAGGGGTCATCCTTTGCTGCTGGAAAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTACTGCACCAGCTTCAAATATTCACTCTTGGCAGAGCTTTATCTGAGCAAGCACTGATTTACCCTCCTGGTGATCTCCCTGCAAATTGCCGTGCCCGAGGTTCTGGGCTTGGTGTGTCAGGCCCAAAGGCAGGAACTGAAGTCAGCCTTGGCAATGCCCTACCTTGTAGGATTGCTTTCGAGAGGGGAAAAGAGCTCCATGTTTACTTTCTAGCAATCTCTTTAGGAATATCTGGGTGGCTCGTTCTTGCGGAAGAATTGCCACTGAAGAAGTCTCATGGAGTGGTTCGGTCTGTTGCTCCTTTGGCTGGGTGCAATCCCAGGATTGATGATAATCATGCAACGTGGTTACACTTGCGGATTCGGGGATCCTCTTTACCCTTTCTAGATCCTGTCCAATTCAAAGACTATGGGAAAAAGAAAGCAAAAGTTTCGGTAGATGGCAGATGGACATTGGCGTTCAGAGATGAAGAGACTTGCAAGTCTGCTTTTCTCATGATTGTTGAAGAAATCAATTTTCTAAGTAATGAGGTTCATAGAAGACTAAAACCATTGCTCAACCTTGAAACTGAGATAGATTTATCAGGTTCGTCTGTGTGTGTTCTGGAGGATACCTCTCCGTATAGAACACGCCCCAATTAA 2205 0.4154 MEKQVMGEFVRVLKLTRTVSVPLQLLQTAKWLSSKPLVSGSDVLDIRIVKETIFEWGFLAVCSRVDEVVSFPLYVEAIRFAFHEESMVRTAVRAVTLNVYHVGDDSVNRYITSIPHKDYFSNLISFFRKQSMDLNKRLSVTQLNPGPDAISAIIAAVDEIEDNLYYFSDVVSSGIPDVGRLITDGIMMILIFPLLLPSLRVLPNNDMQDGVVPSLYLLCCILRIVKIKDLANTIAAALFYPLEAFTKSSWGKFDCFISDHGFDSDAVLVQNDCTSSNLSLREVLLAYITKGNDILVLGSLSVLAILLQTKELDESMLYWLGILPQRKQHKKLLLQALVGEGSGEEQLFSSKSSLTRDGIGTDVNVYHNKIKEQYGVSFLPSNVVISPHVHRFQVIDALVNLCCRPNISAEILWDGGWLLRQLLPYSVSEFNSNHLELLKVSYNNYASALVEEVRGIWSDFLISVLCDEWRKCKRAMESSSPRKEPSCVLLLLWKIASDGYITEGSSFAAGKRMHELVKVFVLLHQLQIFTLGRALSEQALIYPPGDLPANCRARGSGLGVSGPKAGTEVSLGNALPCRIAFERGKELHVYFLAISLGISGWLVLAEELPLKKSHGVVRSVAPLAGCNPRIDDNHATWLHLRIRGSSLPFLDPVQFKDYGKKKAKVSVDGRWTLAFRDEETCKSAFLMIVEEINFLSNEVHRRLKPLLNLETEIDLSGSSVCVLEDTSPYRTRPN 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03448 734 Pfam Uncharacterised conserved protein 66 100 IPR019155 -
Spst3g03448 734 PANTHER UNCHARACTERIZED 267 708 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03448 Spst-Chr3 84280541 84292135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03448 K19513 - gmx:100786267 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03448 3 84280541 84292135 Spst3g03448 3 84280541 84292135 ECH
Spst3g03448 3 84280541 84292135 Spst9g02909 9 63186327 63194614 PCT