Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03437 ATGATAAACGGTAAGGATATTTATGATGTTTTCGCGGCTATTGTCCCCCTATACGTCGCTATGCTATTAGCATATGGTTCAGTTCGGTGGTGGAAAATTTTCACACCTGATCAATGTTCTGGCATAAACCGCTTTGTAGCTGTGTTCGCAGTTCCACTGCTTAGTTTCCACTTTATCTCCTCCAATAACCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTCTCTTCAAAAGGTTGTCATTCTGGGTGCTCTCTTTCTATGGAACACCTTCACAAAACATGGCAGCCTAGACTGGACCATCACCCTCTTCTCTCTTTCCACTCTCCCAAACACACTTGTCATGGGGATCCCTCTATTGAAGGCCATGTATGGGGACTTTTCAGGGACCCTAATGGTTCAAATTGTGGTGTTACAAAGCGTCATATGGTACACTCTCATGTTGTTCATGTTTGAATATAGAGGTGCCAAACTTCTCATCACAGAACAGTTCCCTGAGACTGCAGGCTCCATCACCTCCTTCAGGGTTGACTCAGATGTTGTCTCACTCAATGGTAGAGAGCCACTGCAAACTGATGCTGAGATAGGAGAAGATGGAAAGCTCCATGTGGTGGTTAAGAGATCAGCAGCTTCTTCTATGATATCTTCTTTCAACAAATCCCATTTAACTTCTATGACTCCTAGAGCATCTAATCTCACTGGGGTTGAGATCTATTCCGTTCAGTCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTCAACCAAACAGACTTTTATGCCATGTTTGCAAGCAAGGCACCGAGTCCAAAGCATGGCTACACAAACAGTTTCCAGAGTAATAGTGGTATTGGTGATGTTTACTCGTTGCAATCTTCGAAAGGGGCAACACCAAGGACTTCTAATTTTGAAGAGGAGATGTTGAAGATGCACAAGAAGAGAGGAGGGAGGAGCATGAGTGGAGAGCTGTTTAATGGAGGTTTGGTTTCTTCTTACCCGCCTCCGAATCCAATATTTTCAGGGTCTACAAGTGCTGCTGGCCCAAAGAAGAAAGATAGCACTGGTGGCGGTGCTGCACCTAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGCGCATCACCAGTTTCTGAGGGGAATTTGAGGCATGCAGTTAATAGAGCTGCCTCTACCGACTTTGGGACAGTTGATCCTTCTAAAGCTGTTCCACACGAAAGTGTTGCTTCCAAAGCTGTACAAGAATTGATTGAGAACATGAGTCCTGGTCGTAGAGGGAGCGGAGAGAGGGAGCTTGAAATGGATGAAGGAGCCAAATTTCCCACAAGTGGATCTCCATACACCTGCCAGAAGAAGGTGGACATGGAAAGCAATGCAAACAAAAACCAGCAGATGCCACCTGCAAGTGTCATGACAAGACTCATCCTCATCATGGTTTGGAGAAAACTCATTAGAAATCCTAATACCTACTCCAGTCTTTTGGGACTCGCATGGTCTCTCATATCATTTAGGTGGCACATTCAAATGCCAACTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTAGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTACAACCCAAGATCATTGCCTGTGGAAAATCTGTGGCAGCATTTTCTATGGCTGTTAGGTTCTTGACAGGTCCAGCTGTTATTGCTGCAACCTCCATAGGCATTGGACTCCGTGGAGTTCTTTTGCATGTTGCAGTTGTCCAGGCTGCCCTACCCCAAGGTATCGTTCCCTTTGTGTTTGCTAAAGAATACAATCTCCATGCAGATATACTTAGTACTGCGGTTATATTTGGAATGCTGATTGCATTGCCCATAACCATACTCTACTACGTGCTGCTAGGACTCTAA 1896 0.4467 MINGKDIYDVFAAIVPLYVAMLLAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNNPYAMNYHFIAADSLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGTLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNSGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLVSSYPPPNPIFSGSTSAAGPKKKDSTGGGAAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKAVPHESVASKAVQELIENMSPGRRGSGERELEMDEGAKFPTSGSPYTCQKKVDMESNANKNQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLISFRWHIQMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGLRGVLLHVAVVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03437 631 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 631 - -
Spst3g03437 631 Pfam Membrane transport protein 10 626 IPR004776 GO:0016020|GO:0055085
Spst3g03437 631 MobiDBLite consensus disorder prediction 336 361 - -
Spst3g03437 631 NCBIfam auxin efflux carrier 1 631 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03437 Spst-Chr3 84133845 84136742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03437 102 631 Organic Solute Cotransporters AT5G57090 74.638 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03437 K13947 - gmx:100305383 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03437 3 84133845 84136742 Spst3g03437 3 84133845 84136742 ECH
Spst3g03437 3 84133845 84136742 Spst9g02899 9 63065700 63067035 PCT