Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03407 ATGGCAGATCCAGCAACTTTCATTGCTAGCTGGATAACTCCCTCTTCCCTCTTCATCTTCGTTAACCTCATCATAGGAATGGTAGCAATCACTTCTCGCTTCACTCCCAAAAACCACGATCACCACCACCATCATCTTGTTCGTTCACCCTCCCTTCTCCAGCGAGTTAGGTCCTTCAATCTCACTCACTACTATAGCCATCACGACCAAGAGTGCACTCAGCCCCAACTTGTTCCAACACCCTCAGTATTGGAGCGACTCTCGTCCTTCAATCTCTCCTTCCACAAACACGAATCCACACATGCACAAACACAAAGCGTCCAATCCGAACATTCCGAAACTAAAACCCCGGAACTGATTCCGACACCCTCGCTGTTGGAACGACTCACGTCTTTCAATCTTTCCTTACAAGAACAAGAATCCACAGATGCACAAACACAAGGCGTCCAACCTGAACACTCCGAACCTAAAACCCCGGAACTGATTCAGACACCCTCACTGTTGGAGCCGCTCACGTCTTTCAATCTTTCTCAACACAAACAAGAACCCACGCATGCACAAACACAACAAGTGCAAGCCGAACCCGAACATGAACAGCCGGAACTGGTTCGGAGTCCCTCGCTCTTGCAGCGGCTACAGTCCATAAACCTGTCGCGTCTCTACAGATCGGAGTCCACGCACGGACAGGATCCGGATTTAGGGGATCCGGGTCGGGGGTCGGGTAAGGCGGAGATGCGGAAATCGGCGAGCGAGAGGGGGGGTCGGATAGAGCGCGAGGAGGAAGATGAGGTAGAGAGGCGGAGACCGAAAACGGCGAGGGCTGAGACGACATCGTGTAAAGAAGACGAAGAGGTGGACGCCAAAGCTGATGATTTCATCAACAGGTTCAAGAAGCAGTTGAGGTTGCAGAGGATTGACTCTCTTCTCCGTTACCGAGCAGGTAACTGCTGA 951 0.5163 MADPATFIASWITPSSLFIFVNLIIGMVAITSRFTPKNHDHHHHHLVRSPSLLQRVRSFNLTHYYSHHDQECTQPQLVPTPSVLERLSSFNLSFHKHESTHAQTQSVQSEHSETKTPELIPTPSLLERLTSFNLSLQEQESTDAQTQGVQPEHSEPKTPELIQTPSLLEPLTSFNLSQHKQEPTHAQTQQVQAEPEHEQPELVRSPSLLQRLQSINLSRLYRSESTHGQDPDLGDPGRGSGKAEMRKSASERGGRIEREEEDEVERRRPKTARAETTSCKEDEEVDAKADDFINRFKKQLRLQRIDSLLRYRAGNC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03407 316 Pfam Domain of unknown function (DUF4408) 7 34 IPR025520 -
Spst3g03407 316 MobiDBLite consensus disorder prediction 178 208 - -
Spst3g03407 316 Pfam Cotton fibre expressed protein 282 312 IPR008480 -
Spst3g03407 316 PANTHER COTTON FIBER (DUF761) 7 312 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 138 159 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 225 285 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 178 195 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 98 119 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 221 285 - -
Spst3g03407 316 MobiDBLite consensus disorder prediction 98 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03407 Spst-Chr3 83878519 83879469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03407 - - gmx:102664184 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03407 3 83878519 83879469 Spst9g02874 9 62908128 62908874 PCT