Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03393 ATGGCCAAGCCTGAGACTGTAGTCAACCATTCTACCATGCGTCGCAGACCCACAGCCAAGGCCACCTCCGTTGATGGCCTCTTCATTTCTCCTGAGTCCACCGACAGCTCTGGCGAAGACTTGATAAAGGATTCCGGTTCCGACGACTCCATCGACACCATGGACAGCGCCACAGCCTATTCACAACCACCCCAAAAACATGAGACTGAAACCTCCATCCTTGAATTCGCTTACCGTCCTTCTATCCCGGCTCACCGCAGAGTCAAGGAAAGTCCTCTCAGTTCCGACAGCATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTCTGTATTGTAGTCCTTGTTGCAGTAAACAGCAGACTCATCATCGAGAATTTAATGAAGTTCAAAGTCATTGAGAGACTGGCCCCTCTTCATGTGTTGGTAATGCCGTTGATGGATTCTCCTGAGAATAAACTATGCTCTGTTCTTTCTCTTGTGGTATTTCCTTTTACTGCCTTTATAGTGGAGAAGTTGGCACAACGAAGGTGTATACCTGAACCAGTAAGTGATCAGGCCATGTGTGATTCTGCTTTTATATCCGGTGTCGCGCTAATGCTATTTTCTTGCGTTGTGTGGTTAAAATTGGTGTCCTATGCACATACAAACTATGATATGAGAGAACTTACCAAATCAATTGAAAAGGGAGAAGCACTGCCCAATAATGTGAATATGGACTATCCTTACAGTGTGAGCTTCAAGAGCTTGGCATACTTCATGGTTGCTCCTACATTATGTTACCAGCAAAGCTATCCTCGCACTCCTTATATTCGAAAGGGTTGGGTGTTTCGTCAACTTGTGAAGCTGATAGTATTTACAGGAGTTATGGGATTTATTATAGAACAATACATTAATCCTATTGTACAAAATTCACAGCATCCTTTCAAGGGAAACCTTCTTTATGCCATCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATCTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTTCACCTTTGGTTAAATATACTGGCAGAGCTTCTTCGATTTGGTGATCGCGAATTCTACAAGGACTGGTGGAATGCCAAAACTGTTGAAGATTATTGGAGAATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCGTGTTTAAGGCAGGGTATACCAAAGGCAGTGGCTCTTTTAATTGCGTTCCTGGTTTCTGCTTTATTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATATTCAAACTATGGGCTTTTGGTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTCATTACCTGCAAAATAAATTCAGAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATTTTCAGTATCCTAGGACAACCTATGTGCGTACTGCTCTACTATCATGACTTGATGAGTAGAAAAAACAAACATGACCAGAGCTAG 1464 0.429 MAKPETVVNHSTMRRRPTAKATSVDGLFISPESTDSSGEDLIKDSGSDDSIDTMDSATAYSQPPQKHETETSILEFAYRPSIPAHRRVKESPLSSDSIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKFKVIERLAPLHVLVMPLMDSPENKLCSVLSLVVFPFTAFIVEKLAQRRCIPEPVSDQAMCDSAFISGVALMLFSCVVWLKLVSYAHTNYDMRELTKSIEKGEALPNNVNMDYPYSVSFKSLAYFMVAPTLCYQQSYPRTPYIRKGWVFRQLVKLIVFTGVMGFIIEQYINPIVQNSQHPFKGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDYWRMWNMPVHKWMIRHLYFPCLRQGIPKAVALLIAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLVLITHYLQNKFRNSMVGNMIFWFIFSILGQPMCVLLYYHDLMSRKNKHDQS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03393 487 PANTHER STEROL O-ACYLTRANSFERASE 48 181 IPR014371 GO:0008374
Spst3g03393 487 MobiDBLite consensus disorder prediction 51 65 - -
Spst3g03393 487 MobiDBLite consensus disorder prediction 1 65 - -
Spst3g03393 487 PIRSF Oat_dag 30 184 IPR027251 GO:0004144|GO:0019432
Spst3g03393 487 PIRSF Oat_dag 181 486 IPR027251 GO:0004144|GO:0019432
Spst3g03393 487 Pfam MBOAT, membrane-bound O-acyltransferase family 239 471 IPR004299 -
Spst3g03393 487 PIRSF Oat_ACAT_DAG_ARE 5 187 IPR014371 GO:0008374
Spst3g03393 487 PIRSF Oat_ACAT_DAG_ARE 177 485 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03393 Spst-Chr3 83650546 83660034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03393 25 483 Lipid Metabolism Gene Families AT2G19450 61.258 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03393 K11155 - gmx:548005 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03393 3 83650546 83660034 Spst3g03393 3 83650546 83660034 ECH
Spst3g03393 3 83650546 83660034 Spst9g02856 9 62745732 62756920 PCT