Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03376 ATGTCTAGAGTTGAAGGTGGTAAAAGGAGTGGTGAAGAGGAGAACGATTTGTTATTAAAAGATGTTGAAACCAGAGGTAAAGCTCTGAGCAGAGACAAAACCTCGTCCACAAATTCAAAATCTTCCAAATCCCAGTTACTTGATCCCAAATCCAAGCCTAAAGCTAAAGATAACTTGCGTAAGGATAAGAAGTCCATATGGAATTGGAAGCCGTTGAAGGCTCTTTCCCTCTGTCGCAGTAAGAAGTTCAAATGTAGTTTTTCTGTCCAAGTCCATGTGATTGAAGGGTTGCCTTTGAGTTTCAATGATTCTTGCCTTTGTGTGTATTGGAAGTTGAAAGATGAGCATTTGGTGACCCCTCCAGCTAAGGTGATTCAAGGTGTGGTTGAGTTTCAAGAGATTTTGACACACACTTGCTTAATCAATGGAAGAAGGAGTGGACCCCAAAATTCTGCTAAATATGAAGCTAAGCATTTTCTGCTCTATGCTTCTACGCCTGGTGCCCAACTTGATTTGGGAAAGCACCGGGTGGATCTCACAAGGTTGCTTCCGCTCACTCTGGAAGAGCTTCAAGAGGAGAAAAGGTCAGGGATATGGACTACAAGTTTTAGATTATCTGGAACCGCAAGGGGTGCAGTAATGAATGTCAGTTTTGGCTATATCAATGTTGGTGACAATACTAGTTCTACCAGAGACAACAATAGTGATCCTCTTAATATACTCACTCCCAAAGAATATTGTATGCCTTCGATGGATCCTCTTAAACCTAGTCAGGTTGACAGGAGGATTAGATATACTGGAAGTTTGCCAAACTTTCCCAGTAATTATTATTCATCTCAAAATGTAGATGAGATGAAAGATCTTCATGAGGTGTTGCCATCATCAAAATCAGCTCGAGCCAGCTCAGTATACATCTTTTATAAGGATTTTGTTGAAGAAAAGGGTTGTAGTCCTCTGCGTGACAAACCTGAATCTGAGGGAATTAAAGAAAATATCGACCCAATCAAACCAGTTGTTTGTTCTTCATCTGATAATGAAAAGGAAAAGGCTGAAGAGAATCCAGTTAATGTGGAAAAAACATGCAGTCTATTGCATGACAAACCTGAATTTGATGTGTTTCAAGAAAACCTGGAGACAGTTACGCTGAATGAATATCCTTTACCTGATTCTGGAATAGAAAATTTCAAAGAATGTGAAGGTAATGAATTTCATGTTGTTGATAAGGGCATTGAATTTTCATCAGATGAACAAGTTGAACTTGAGGAATCTATTGGAAAAGCTTTTGTTGATGTCTACACAGTTGACAGTACTCGGACCCTAGACAGTGCTGGTATGCAAGTATCTATTGAAGACCATGATAAACAGGATTCCCTGGATGAACTAAGCAAAAACTCTAAGGAAAGTGTTGCTGTACGTGAATTTTCTAACGGAAAGGATGACTTGTGGACGAAAGAACTTCTACTGCAAGAATTAGAATCGGCTTTAAATAGTGTCTCTGAGTTCGAGACAGCGGCAATGGATTCTCCTAAAATCATGGAAGTAAAATCTGAATATAAGTTAAGAAAGTCACAAAGCTTGGATGATTGTACAGAATCAATTGCCAGTGAGTTTTTAAGTATGCTAGGCATAGACCATAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGCTTGAGTCTCCAAGAGAGCTCCTTCTAAGACAATTTGAGAATGAAGTTCGATCAGAGGGCTTCTCTTTGTTTGATTTTGACACGGACAGTGATAATGAAGCAGATGGTGTTTATGATTCGTCTTTTGAATCTAAGCATTTGAAGTTCTCTAGGGGTATTAAGCCAGCATCCTCAATGCCAGATCTACGTAGAGAGCATCTAATTGAGTTTGAGGATTTGAGGAGCAAGCAAAAGGTCCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAACGCTTTTCAGCATTCTCCTACAAAAGATTATAATGGCTTTGGAAGTCCAGTATATTTTCTACCTGAAGAAACTACTCTACCATTACCTCCTCTGGCAGAGGGGTTTGGTCCTTTTCTTCAGACCCAGGATGGAGGGTTTCTACGGTCAATGAATCCCTCGCTTTTCAGGAATAGCAGAACTGGTGGGACATTAATCATGCAGGTTTCCAACCCTGTTGTGGTGCCTGCTGAAATGGGTTCTGGGATAATGGAGATTTTGAAGTATTTCGCTTCGGGGGGAATTGAAAAACTTTCCAAGCAGGCAAACAAGTTAATGCCTCTGGAAGATATCACAGGGAAGACAATGCAACAAATATCAAGGGAAGCAAAAGCAGTCTTGAAGGGAACAAACAGGCAATTCCAATTGCAGCATGATTTGGTAACAGGACAGGATTCTACTTGCGCGCAAAAAGGCTTGAAAGGAACACTATCTGGTCGACTAATGTCTAATAAGTTCAGTTCAGATTCAATTGGCAACCATGGAGGCTCAGAGTTTGTTTCATTGGATGATCTGGCTCCATTAGCTACGGATAAAATTCAAGCACTTTTACTGGAGGGTTTGAGAATACAATCTGGGATGTCAAATGAGGATGCACCATCAAACATCATTGTACAATCCTATGGGGACATTTCAACTCTGCAAGGCAAGGGGGTTAGTATTAGGGGGTCCCTTGGTCTGGATGGAACTGCTGCCATGCAAGTGTTGGATACGAAAAACAGCAACAGTGATGAATATGATGGTGTTGATGGCATAATGGGCCTATCATTAACTCTTGATGAATGGATGAGGCTGGATTCTGGTGAGATTGATGATGATATAGATAACATCAGCGAGCATACTTCCAAACTTCTTGCTGCCCATCATGCTAATTCTTTTGACTTGATTCGTGGGAAGAGTTCCAAGGGAGAGATGAAAAGAGGCAGGAAATGTGGTTTGTTGGGAAACAAATTCACGGTAGCTCTAATGGATCAGCTTCGTGATCCTCTGAGAAACAATGAGCCGGTTGGGACACCAATGCTTGCTCTTATTCAAGTCGAGAGAATGTTCATCCCACCAAAGCAACAGATATGTAGGCACTTATATGAGGCAGGGAACAACAATGATGAGTGTGAAATGGTACCCAAGGTGGAGATGAAGGCCAACGAAGAAGAGAAAAGTTATGAAGAGGAGGCCATTCCTCAGTTCAAAATTACGGAAGTACATGTTGCAGGTCTAAAAATTGATCCTCGCAAAAAGAAGTTTTGGGGCACTTCAAGACGACAACAGCAACAATCTGGTTCCCGCTGGTTGATTGCTAATGGAATGGGCAAGAGCTCGAAGAATCCACCATTGAAGTCAACTGTTGTATCTAAATCTAGTTCTCCAATCACCACCACAAACGTCCAAGAGGGTGATACATTGTGGAGCATATCATCTCGTATCGGTGGTACACCAACAAGATGGAAGGAATTTGTAGAACTAAATCCACACATAAGAAATCCCAATATCATTAATACCGAATAA 3504 0.4107 MSRVEGGKRSGEEENDLLLKDVETRGKALSRDKTSSTNSKSSKSQLLDPKSKPKAKDNLRKDKKSIWNWKPLKALSLCRSKKFKCSFSVQVHVIEGLPLSFNDSCLCVYWKLKDEHLVTPPAKVIQGVVEFQEILTHTCLINGRRSGPQNSAKYEAKHFLLYASTPGAQLDLGKHRVDLTRLLPLTLEELQEEKRSGIWTTSFRLSGTARGAVMNVSFGYINVGDNTSSTRDNNSDPLNILTPKEYCMPSMDPLKPSQVDRRIRYTGSLPNFPSNYYSSQNVDEMKDLHEVLPSSKSARASSVYIFYKDFVEEKGCSPLRDKPESEGIKENIDPIKPVVCSSSDNEKEKAEENPVNVEKTCSLLHDKPEFDVFQENLETVTLNEYPLPDSGIENFKECEGNEFHVVDKGIEFSSDEQVELEESIGKAFVDVYTVDSTRTLDSAGMQVSIEDHDKQDSLDELSKNSKESVAVREFSNGKDDLWTKELLLQELESALNSVSEFETAAMDSPKIMEVKSEYKLRKSQSLDDCTESIASEFLSMLGIDHSPRGLSFEGELESPRELLLRQFENEVRSEGFSLFDFDTDSDNEADGVYDSSFESKHLKFSRGIKPASSMPDLRREHLIEFEDLRSKQKVQMLEDLETEALMREWGLNENAFQHSPTKDYNGFGSPVYFLPEETTLPLPPLAEGFGPFLQTQDGGFLRSMNPSLFRNSRTGGTLIMQVSNPVVVPAEMGSGIMEILKYFASGGIEKLSKQANKLMPLEDITGKTMQQISREAKAVLKGTNRQFQLQHDLVTGQDSTCAQKGLKGTLSGRLMSNKFSSDSIGNHGGSEFVSLDDLAPLATDKIQALLLEGLRIQSGMSNEDAPSNIIVQSYGDISTLQGKGVSIRGSLGLDGTAAMQVLDTKNSNSDEYDGVDGIMGLSLTLDEWMRLDSGEIDDDIDNISEHTSKLLAAHHANSFDLIRGKSSKGEMKRGRKCGLLGNKFTVALMDQLRDPLRNNEPVGTPMLALIQVERMFIPPKQQICRHLYEAGNNNDECEMVPKVEMKANEEEKSYEEEAIPQFKITEVHVAGLKIDPRKKKFWGTSRRQQQQSGSRWLIANGMGKSSKNPPLKSTVVSKSSSPITTTNVQEGDTLWSISSRIGGTPTRWKEFVELNPHIRNPNIINTE 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03376 1167 MobiDBLite consensus disorder prediction 31 46 - -
Spst3g03376 1167 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 80 219 IPR019448 -
Spst3g03376 1167 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1164 IPR039614 -
Spst3g03376 1167 ProSiteProfiles C2 NT-type domain profile. 75 222 IPR019448 -
Spst3g03376 1167 MobiDBLite consensus disorder prediction 1085 1127 - -
Spst3g03376 1167 ProSiteProfiles LysM domain profile. 1124 1167 IPR018392 -
Spst3g03376 1167 MobiDBLite consensus disorder prediction 1083 1127 - -
Spst3g03376 1167 Pfam LysM domain 1128 1163 IPR018392 -
Spst3g03376 1167 Gene3D LysM domain 1114 1166 IPR036779 -
Spst3g03376 1167 CDD LysM 1128 1163 IPR018392 -
Spst3g03376 1167 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03376 Spst-Chr3 83454010 83457593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03376 - - vra:106766502 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03376 3 83454010 83457593 Spst3g03376 3 83454010 83457593 ECH
Spst3g03376 3 83454010 83457593 Spst9g02841 9 62610674 62614320 PCT