Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03369 ATGAGTTTCATATTGGGAAAGACGAAAACCCCCGCAGAAATCTTGCGGGAAAATAAGAGAATGCTGGACAAATCAATTAGAGAAATAGAACGAGAGAGACAAGGTTTGCAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACAAGGCATCAGATCGAAAAGTTTTATAAGCTCAAATCGCAGCTCCAGGGAGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCAATGGGCGAGGCAATGAAAGGTGTGACTAAGGCAATGGGAAAGATGAACAGACAGATGAACTTGCCATCATTGCAGAAAATCTTACAAGAATTTGAGTATCAGAATGATAGGATGGAGTTGATTGCAGAGGTGATGGAAGACGCAATGGATGATGCTTTTGAAGGGGTTGATGAAGTAGAAGAAACAGAAGAATTAGTGAATCAGGTTCTTGATGAGATTGGAATCAACATCAACCAAGAGCTTTTGAAAGCACCATCAACAGCTGTTGCTGCCCCAGCTGGAAAGACTAAAGTGCCTCAAGTGGAAACTGCTGGGGATGATGCCGCTGCCATAGATAGTGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAA 672 0.4107 MSFILGKTKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGKMNRQMNLPSLQKILQEFEYQNDRMELIAEVMEDAMDDAFEGVDEVEETEELVNQVLDEIGININQELLKAPSTAVAAPAGKTKVPQVETAGDDAAAIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03369 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Spst3g03369 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Spst3g03369 223 Gene3D - 6 180 - -
Spst3g03369 223 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03369 Spst-Chr3 83386048 83388534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03369 K12191 - gmx:100819241 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03369 3 83386048 83388534 Spst3g03369 3 83386048 83388534 ECH
Spst3g03369 3 83386048 83388534 Spst9g02838 9 62585770 62589623 PCT