Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02973 ATGGACATCGACCAGTTGCCCAAGAACGCTGCCAACTACACAGCGTTAACGCCGTTGTGGTTTCTGGAAAGAGCAGCTACGGTGCACCCCACTAGAAACTCCCTCATCCATGGATCTCGTCGCTACACCTGGCACCAGACCTATCACCGTTGCCGTCGATTTGCCTCCGCCCTTTCCAACCATTCCATCGGTTCAGGAAACACTGTAGCTGTTATTGCACCCAATATTCCAGCTCTTTATGAAGCTCATTTTGGAATTCCAATGGCAGGGGCTGTGTTGAATCCTGTTAATATTAGGCTAAATGCATCCACTGTAGCTTTTCTTCTTGGTCATTGCACAGCTGCAGCTGTAATAGTTGATCAAGAGTCCTTTTCTTTGGCAGAAGAAGCTTTGAAAATATGGTGTGAGAAAGCCAAAACCTTCAGCCCTCCACTTTTAATAGTCATCGGTGATGAAAATTGCGACCCCAAGTCGCTTAAATATGCTGTGGGCAAAGGAGCCATTGAATATGAGGATTTTCTTCAGAGTGGTGATCCTGAATATGCATGGAAACCTCCTGAGGATGAGTGGCAGAGTATTGCTTTGGGTTATACATCCGGTACCACTGCTAGTCCCAAGGGTGTGGTATTACATCATCGTGGAGCCTATCTAATGTCTCTGAGTGGAGCTCTTATCTGGGGAATGACTGAAGGTGCCGTGTATCTTTGGACACTCCCCATGTTTCATTGCAATGGTTGGTGTTACACATGGACACTTGCAGCTATGTGTGGTACAAACATATGCCTTCGCCAGGTAACAGCGAAGGAAGTTTACAAAGCCATTGCCAAGTATAAAGTGACTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAATCAATGCCCCACCTGAGGAAACCATACTTCCTCTCCCTCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGCATGTCTGAACGTGGATTTCGTGTCACACACACTTACGGTCTCTCTGAAACCTATGGCCCCTCTGTGTACTGTGCCTGGAAACCAGAATGGGAATCACTTCCTCCTGAAAAGCAAGCCCAGCTCAACGCAAGACAAGGGGTTAGGTACATTGGCTTGGAAGGCCTGGAAGTAGTGAACACAAAATCCATGCAACCTGTTCCTGCTGATGGTAAAACTGTAGGTGAGATTGTGATGCGGGGCAACTGTGTGATGAAAGGCTACTTAAAGAACCCTAAAGCTAATGAGGAGACCTTCGCAAATGGATGGTTTCATTCCGGGGATCTTGCTGTGAAGCATCCAGATGGATATATAGAAATTAAAGACAGATCAAAGGACATCATAATCTCTGGTGCTGAAAATATCAGCAGTGTGGAGGTAGAGAACGCTCTTTACTCGCATCCTGCAATACTGGAAGCAGCAGTTGTTGCAAGGGCAGATGAGAAATGGGGTGAGTCTCCTTGTGCTTTTGTGACATTGAAGCCAGGAGTGGATAAAAGTAATGAGCAACGTTTAACTGAGGATATACTGAAGTTCTGCAAGGCCAAGATGCCTTCTTATTGGATTCCAAAATCAGTTGTGTTTGGACCCTTACCTAAGACAGCTACTGGGAAGATACAGAAGCATTTGCTAAGGGCAAAGGCAAAAGAGATGGGACCTGTTAAGATGAGCAAGTTATAA 1689 0.4594 MDIDQLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRRYTWHQTYHRCRRFASALSNHSIGSGNTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCTAAAVIVDQESFSLAEEALKIWCEKAKTFSPPLLIVIGDENCDPKSLKYAVGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAAMCGTNICLRQVTAKEVYKAIAKYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPEKQAQLNARQGVRYIGLEGLEVVNTKSMQPVPADGKTVGEIVMRGNCVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILEAAVVARADEKWGESPCAFVTLKPGVDKSNEQRLTEDILKFCKAKMPSYWIPKSVVFGPLPKTATGKIQKHLLRAKAKEMGPVKMSKL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02973 562 PANTHER ACYL-ACTIVATING ENZYME 6 557 - -
Spst3g02973 562 Gene3D - 3 448 IPR042099 -
Spst3g02973 562 Pfam AMP-binding enzyme C-terminal domain 462 541 IPR025110 -
Spst3g02973 562 FunFam Long-chain-fatty-acid--CoA ligase FadD 3 448 - -
Spst3g02973 562 Pfam AMP-binding enzyme 22 453 IPR000873 -
Spst3g02973 562 FunFam 2,3-dihydroxybenzoate-AMP ligase 448 555 - -
Spst3g02973 562 Gene3D - 449 556 IPR045851 -
Spst3g02973 562 SUPERFAMILY Acetyl-CoA synthetase-like 10 553 - -
Spst3g02973 562 CDD ttLC_FACS_AEE21_like 13 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02973 Spst-Chr3 79412398 79415994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02973 2 562 Miscellaneous Gene Families AT3G16910 75.267 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02973 K01913 - gmx:100811706 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02973 3 79412398 79415994 Spst3g02973 3 79412398 79415994 ECH