Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02928 ATGCAGTCTCACTCCCCGTCTCCACAACTCGGAGAACCTAGTCTATCGAAAATGAATGCCGATAACGGCGCAAAACTCGACAACACCGATGCCATGCAAATGGATTCCAGCGACACTCCCTGCTGTCAAGTAAAAGACGAAGAAAAGGAGGAACTCACAGAGACTATGAACAAACTGCATATTGAAGGATCGTCTTCTGGGAATGAATTGTCTAACATCAGAAGAAAACCTGTCATCATTATTGTTGTAGGAATGGCAGGAAGTGGGAAAACGACCCTCATGCATAGGTTGGTTTGCCATACACATATGAAAAACATTCGAGGTTATGTGATGAATCTTGACCCTGCGGTCATGACACTCCCATATGCTGCGAACATTGACATACGAGATACTGTTAAATACAAAGAAGTTATGAAGCAGTTTAACCTTGGTCCTAATGGTGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAGTTTGATGAGGTAATTTCTGTAATTGAGAGACGAGCGGATCAACTTGACTATGTGCTTGTGGATACTCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCTTATGTAGTAGATACACCTCGTTCAGAAGATCCTACCACTTTCATGAGTAATATGTTGTACGCATGCAGTATCCTCTATAAAACAAGGTTACCTCTCATCTTGACATTCAACAAGGTTGATGTAGCAGCACATCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGCAAGTTCAGATCACTCATACACATCAACTTTAACTCAAAGCCTTTCTCTCGTGCTAGATGAATTCTACAACAATTTGAAATCAGTCGGAGTTTCTGCAGTTTCTGGTGCAGGAATGGAAGCTTTCTTTAAGGCTGTTGAAGCCAGTGCAGAGGAATACATGGAAACCTACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTGGAGGAAGATCGCAGGAAGGACAACATGGATAAACTGAGGAGAGACATGGAGAAATCTGGAGGAGAAACTGTAGTCTTGACCACTGGTTTAAAGGACAAACCAAAAAGTGAAAGTAAAAGCATGATGGATGAGGAAGACGAGGTTGAGGAGGACGAGGAAATGGATGATGATGATGATTTGGGGATATATACTGAAGATGAGAATGCTATAGATGAGGACGAAGATGAGGAGGTTGATAGGTTCGGCCTCTGA 1275 0.4259 MQSHSPSPQLGEPSLSKMNADNGAKLDNTDAMQMDSSDTPCCQVKDEEKEELTETMNKLHIEGSSSGNELSNIRRKPVIIIVVGMAGSGKTTLMHRLVCHTHMKNIRGYVMNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQAAASSDHSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGMEAFFKAVEASAEEYMETYKADLDKRREEKQRLEEDRRKDNMDKLRRDMEKSGGETVVLTTGLKDKPKSESKSMMDEEDEVEEDEEMDDDDDLGIYTEDENAIDEDEDEEVDRFGL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02928 424 Gene3D - 77 335 IPR027417 -
Spst3g02928 424 MobiDBLite consensus disorder prediction 336 424 - -
Spst3g02928 424 CDD GPN1 78 318 IPR030230 GO:0003924
Spst3g02928 424 MobiDBLite consensus disorder prediction 384 424 - -
Spst3g02928 424 FunFam GPN-loop GTPase 1 77 335 - -
Spst3g02928 424 MobiDBLite consensus disorder prediction 1 16 - -
Spst3g02928 424 MobiDBLite consensus disorder prediction 1 48 - -
Spst3g02928 424 Pfam Conserved hypothetical ATP binding protein 82 320 IPR004130 -
Spst3g02928 424 MobiDBLite consensus disorder prediction 336 361 - -
Spst3g02928 424 Coils Coil 324 351 - -
Spst3g02928 424 PANTHER XPA-BINDING PROTEIN 1-RELATED 81 339 IPR004130 -
Spst3g02928 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 317 IPR027417 -
Spst3g02928 424 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02928 Spst-Chr3 78910160 78913384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02928 K24104 - gmx:100797318 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02928 3 78910160 78913384 Spst3g02928 3 78910160 78913384 ECH