Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02927 ATGGCGAAGCACGAGGAGCTCCCGATCCCGATTTACGATAACCTAGAGTTTGTATATGGGGATGGTTCCGCGCTCGAAGAAGCTCAGCTTCGTTTCGATCACTTGAAGTCCAAATTCTTTGAAGTTTTCAAACATCATCCTCAAGTCTTCGCTCGTTCACCTGGGAGAGTTAACTTGATTGGGGAGCACATTGATTATGAGGGGTATTCGGTGTTGCCTATGGCTATTCGGCAAGATACGATCGTAGCGATTCGTAAGAACGAGGCGGAAAAGGTTCTTAGGATTGCTAATGTCGACGGTGAAAAGTATTCTGTTTGTACTTATCCTGCTGATCCTCTCCAGGAAATCGATTTGAAGAATCACAAATGGGGCCATTATTTTATTTGTGGGTACAAAGGTTTCTACGACTACGCAAAACTGAAAGGAGTGGATGTTGGTGAACCTGTTGGACTTGATGTTCTTGTTGATGGAACAGTGCCAACAGGCTCTGGACTATCAAGCTCTGCAGCGTTTGTCTGTTCATCCACAATTGCTATCATGGCTGCTTTTGATGTGAACTTCCCAAAGAAAGAACTTGCACAAGTTACATGTGATTGTGAACGACATATTGGGACACAATCTGGTGGGATGGATCAGGCAATCTCTGTCATGGCCAAGACTGGGTTTGCAGAGCTGATTGATTTCAACCCAATTCGTGCAACAGATGTGCAACTTCCTGCTGGTGGGACTTTTGTGATTGCTCATTCTTTGGCAGAGTCTCAGAAGGCTGTTACTGCAGCGACAAATTATAACAATAGGGTTGTTGAATGCCGTTTGGCTTCTATTGTGCTAGCTATAAAGCTAGGAATGGATCCAAAAGAGGCAATATCAAAAGTGAACACACTGTCTGATGTTGAAGGTTTATGTGTATCATTTGCTCGTAGTATTCATAACTCATCTGATCCCGTACTTGCTGTAAAGGAATATTTGAAAGAAGAACCATATACAGCTGAAGAAATTGAAGAAGTTACTGGGGAAAAGCTTACCTCATTTTTGAACAACAATGCAGCTTATTTAGAAGTCTTAAAAGTTGCAAAGCAATACAAATTACATCAGAGAGCTGCTCACGTGTATTCAGAAGCCAAGAGGGTACATGCTTTCAAGGATGTCGTATCCTCAGATCTAAGCGATGAGGACAAGCTAAAGAGGCTTGGTGACCTTATGAACGAGAGTCATCATAGCTGCAGCGTTTTATATGAGTGCAGCTGTCCAGAGTTGGAAGAACTTGTAAATATTTGTCGTAACAATGGTGCTCTTGGGGCAAGGCTTACTGGAGCTGGATGGGGTGGTTGTGCTGTTGCTTTGGTGAAGGAGAACATAGTTCCACAATTTATCCTTAATTTAAAGGAATGTTTCTACCAGTCAAGGATAGACAAGGGCCTTATTGAGAAGAACGATCTTGGCCTTTATGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCTATATTGAAGTTTTAG 1497 0.4262 MAKHEELPIPIYDNLEFVYGDGSALEEAQLRFDHLKSKFFEVFKHHPQVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNEAEKVLRIANVDGEKYSVCTYPADPLQEIDLKNHKWGHYFICGYKGFYDYAKLKGVDVGEPVGLDVLVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKELAQVTCDCERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLAIKLGMDPKEAISKVNTLSDVEGLCVSFARSIHNSSDPVLAVKEYLKEEPYTAEEIEEVTGEKLTSFLNNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSDLSDEDKLKRLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVKENIVPQFILNLKECFYQSRIDKGLIEKNDLGLYVFASKPSSGAAILKF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02927 498 NCBIfam galactokinase 34 471 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Spst3g02927 498 SUPERFAMILY GHMP Kinase, C-terminal domain 243 472 IPR036554 -
Spst3g02927 498 ProSitePatterns GHMP kinases putative ATP-binding domain. 159 170 IPR006203 GO:0005524
Spst3g02927 498 PRINTS Mevalonate kinase family signature 157 179 - -
Spst3g02927 498 PRINTS Mevalonate kinase family signature 199 218 - -
Spst3g02927 498 PRINTS Mevalonate kinase family signature 53 77 - -
Spst3g02927 498 PRINTS Mevalonate kinase family signature 433 450 - -
Spst3g02927 498 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 240 IPR020568 -
Spst3g02927 498 PANTHER MEVALONATE KINASE/GALACTOKINASE 6 494 - -
Spst3g02927 498 Gene3D - 37 236 IPR014721 -
Spst3g02927 498 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Spst3g02927 498 Gene3D - 237 467 - -
Spst3g02927 498 Pfam GHMP kinases C terminal 394 466 IPR013750 -
Spst3g02927 498 Gene3D - 262 413 - -
Spst3g02927 498 FunFam Galactokinase 262 413 - -
Spst3g02927 498 Pfam GHMP kinases N terminal domain 152 217 IPR006204 GO:0005524
Spst3g02927 498 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Spst3g02927 498 PRINTS Galactokinase signature 150 168 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Spst3g02927 498 PRINTS Galactokinase signature 365 379 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Spst3g02927 498 PIRSF Galactokinase 23 498 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Spst3g02927 498 FunFam galactokinase-like isoform X1 37 236 - -
Spst3g02927 498 Pfam Galactokinase galactose-binding signature 38 86 IPR019539 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02927 K18674 - gmx:100796793 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02927 3 78900700 78905942 Spst3g02927 3 78900700 78905942 ECH