Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02922 ATGATTGACGAAGATGCCCCACGCGAACCGGGAAAAGTAAAGGGAGAGGCATGTCCAGAGCATGAGCACCTGACTATAAATGGGCTTGCAACATTCCATTGTGTGGAATCAAGCTACTGTGATCACCAATCTGTGTTAACAATGACAAACATGAAGCCCTTGGTTCTCTGCTTCTGTCTCCAAGCCATTGTTGTTATGATTACAATACCAGTAAGCCACTGCAGAACCTTCCTTCCAAACAATGGAAACCTGATAGACAGCACCTGCAAGAAGACCCCCAACTACAATCTTTGCCTTCAATATCTCAAGGCAAGCCCTGGGAGCTCCAGTGCTGATGTCTCAGGGCTGGCTCTAATCATGGTCAAAGTCATGAAAGCCAAAGTAAACGATGGCTTGAAAAGAATCCATGACTTGCAAAAGGGGGGAGCCGGACCTAACCTAAAAAAAGCATTGAGTTCTTGTGCTGATAGCTACAACTCAGTGTTGACAACTGATATTCCAGAAGCCACTGAGGCTCTGCAGAAAGGGAACCCCAAGTTTGCTCAAGATGGGGCTAATGATGCTGCTAATGAGGCTAACTACTGTGAGGAAGATTTCTCTGGGCATTCTCCTCTCACCCAACAGAACAATGCTTTGCATGATTCTGCTGCTATTACATCTGCTATTATTAGATTGTTGCTCTAG 684 0.4547 MIDEDAPREPGKVKGEACPEHEHLTINGLATFHCVESSYCDHQSVLTMTNMKPLVLCFCLQAIVVMITIPVSHCRTFLPNNGNLIDSTCKKTPNYNLCLQYLKASPGSSSADVSGLALIMVKVMKAKVNDGLKRIHDLQKGGAGPNLKKALSSCADSYNSVLTTDIPEATEALQKGNPKFAQDGANDAANEANYCEEDFSGHSPLTQQNNALHDSAAITSAIIRLLL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02922 227 CDD CIF_like 83 226 IPR034087 GO:0004857|GO:0043086
Spst3g02922 227 PANTHER PECTINESTERASE INHIBITOR-LIKE 47 226 - -
Spst3g02922 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 226 IPR035513 -
Spst3g02922 227 FunFam Invertase/pectin methylesterase inhibitor family protein 80 227 - -
Spst3g02922 227 NCBIfam pectinesterase inhibitor domain 54 226 IPR006501 GO:0004857
Spst3g02922 227 SMART PMEI_2 80 222 IPR006501 GO:0004857
Spst3g02922 227 Pfam Plant invertase/pectin methylesterase inhibitor 83 221 IPR006501 GO:0004857
Spst3g02922 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 227 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02922 Spst-Chr3 78872101 78872784 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02922 - - pvu:PHAVU_003G117200g 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02922 3 78872101 78872784 Spst3g02922 3 78872101 78872784 ECH