Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02918 ATGCTTCTCTTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCACTCCTGTCGTTGTGGCATGGATATATTCGGAGATAATGGAGTATCGGAAAAACTCTGTCTCGTCCAGAGCTGGTCACTCGGATATCAACTTAGTTGAAATGGGTAGTGATGGTGTTAAAGACGAAGACAAAGCAGTTTTATTGGAAAGAGGAGTTCTGCAGTCAGGATCCCCGAGGGCGCGGAGCTTAACTGCCTCACCGTCAATTATCCGATTCCTTTTGATGGATGAGTATTTCCTTCTTGAAAACCGTTTGACACTTAGAGCGATGTCTGAATTTGGTCTCCTTTTGGCTTACTTTTATCTGTGTGACCGCACAGATTTCTTTGCCTCGTCAAAAAAGAGTTACAATAGGGATCTCTTCCTATTTCTCTATTTTCTCCTCATCCTAGTTTCAGCAATGACGTCCTTTAAAATACATCAAGACAAGTCACCATTTTCTGGGAAATCCATCCTTTATTTAAATAGACACCAGACTGAAGAATGGAAAGGGTGGATGCAGGTTTTGTTTTTAATGTACCATTACTTTGCCGCATCTGAAATCTACAATGCAATTCGTTTGTTCATTGCTGCATATGTTTGGATGACTGGATTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTAGCCAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTTGTGGTGTTCTGTTGTATTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTTGGTATGCTCAACAAGTACAATGAGATTGGGTCAGTCATTGCTGTAAAAATCATTGCTTGCTTCTTGATTGTTATCTTAGTATGGGAGATACCTGGAGTCTTTGAATGGCTTTGGAGTCCATTTACTTTCTTTCTTGGTTATACTGATCCGAATCCTGCCAAATCACATCTTTCTCGGTTGCATGAATGGCATTTTCGCTCTGGGCTTGATCGCTACATATGGATAATTGGAATGATTTATGCTTACTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCAGAAATCAAGCGCAGAGTATCAATCAAAGCAACTGTTGTGCTGATATGCTCATTGGTTGGTTATTTATGGTTTGAGCATATTTACAAGATGGACAAGCTTACATACAATAAATACCATCCTTATACCTCGTGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTTACACAAAGTTTTCGTAGCTATACACTGACACTTTTTGCATGGCTTGGGAAGATTACTCTGGAGACTTACATCTCCCAAATCCATATCTGGTTAAGGTCAGGTGTTCCAGACGGTCAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTAAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCGTATAGACTTTTTGACCTGACAAATACACTCAAAGTGGCATTTGTGCCCAGCAAAGACAACAAGCGTCTTGTACACAATTTAATTACAGCAACAACAATCTCAGTTGTTCTATATTCTTTGTCCCTTGGCTTCCTTAGGATACCTCAAATGTTGGTAAGTGTTAATGCAATAACATTATCTGGTTTAAGTTACTTAAATTATCCTTAG 1689 0.3967 MLLFSPVTPGQVSFLLGITPVVVAWIYSEIMEYRKNSVSSRAGHSDINLVEMGSDGVKDEDKAVLLERGVLQSGSPRARSLTASPSIIRFLLMDEYFLLENRLTLRAMSEFGLLLAYFYLCDRTDFFASSKKSYNRDLFLFLYFLLILVSAMTSFKIHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFCCIVLNNSYMLYYICPMHTLFTLMVYGALGMLNKYNEIGSVIAVKIIACFLIVILVWEIPGVFEWLWSPFTFFLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRVSIKATVVLICSLVGYLWFEHIYKMDKLTYNKYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFDLTNTLKVAFVPSKDNKRLVHNLITATTISVVLYSLSLGFLRIPQMLVSVNAITLSGLSYLNYP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02918 562 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 519 IPR012419 -
Spst3g02918 562 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02918 Spst-Chr3 78837582 78842401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02918 K03377 - gmx:100794337 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02918 3 78837582 78842401 Spst3g02918 3 78837582 78842401 ECH