Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02908 ATGACGCTGGTCGGACTCTTCCTCACCGCCACCAAGCTCGCCGGAGCTCTCTTGACTCTCACCGTCGCCGCCAACGCCTTCTCCTACTCCCGCTTCCGCAACAAGAACCTTCGCCGGTTCCGCTCCCCCATCGACGAATCCTCCAACACTCTCGCCGATTTCAACGTCGCCGAAGAGGAAAATGGGTTTTTCTTTGGTTTGGCTACAGCACCGGCGCATGTTGAGGACAGGCTAGATGATGCTTGGATCCAGTTTGCTGAGGAAAAGAGTGGTGACTCCCAGGGGAGGCGGACAGTGGATGCTGTGATGGGTTCTGCTTCTAGTGACGGTGGGTCCCAGCGGGCCGCAACATCTCCGCGGGGCAGGAAGCCTCTTAAAGTGGCTATGGAGGCCATGATTAGGGGATTTGAGAAGTACCTGGAAGTGGAAGCAAAAGAAGGGGAAGAAGAACCTCGTCCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGATTTTGGTCTGATCCTGAAACAGAAATAAAATTAGCTAAGGATACTGGTGTTACTGTTTTTCGCATGGGAATAGATTGGACAAGAATCATGCCAGTGGAGCCAGTAAACAGCCTTAATGAATCTGTTAACTATGCTGCGTTGGAACGGTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAGGTGATGCTCACTCTTTTCCATCACTCACTTCCACCATGGGCTGGTGATTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTCTCGGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGCATGCTTACTTACTGTGCTGGAGCTTGGCCTGGAGGTCATCCTGATATGCTTGAGGCCGCAACTTCTGCACTTCCAACTGGTGTTTTCCAGCAAGCCATGCATTGGATGTCTATTGCCCACTCAAAGGCATATGACTACATCCATGAACTAAGTAACCCAGTAAATCCAATAGTTGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTTTGTATGACATTACTGCTGTTTCACTGGCTAACTCATTGACTCTCTTCCCTTACATTGATGGAATATCTGAAAAGCTGGACTATATAGGCATAAACTACTATGGACAGGAAGTGGTTTCGGGTGCAGGCCTGAAGCTGGTGGAAAATGATGAGTATAGTGAATCTGGTCGTGGGGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTTCCATGAAAGATACAGACATCTAAATATTCCCTTCATCATCACTGAAAATGGGGTTTCGGATGAGACAGATTTGATCCGCCGTCCATATCTCTTGGAGCATTTGCTTGCTGTTTATGCTGCCATGATCATGGGTGTACGCGTACTTGGTTACTTGTTCTGGACTATTTCTGATAACTGGGAGTGGGCCGATGGATATGGTCCCAAGTTTGGACTTGTTGCGGTTGACAGGGCAAATAATCTTGCACGGATCCCTCGCCCATCTTACCATCTATTTTCTAAAATTGTGAATACGGGCAAAATTACACGTGAAGATCGTGAAAGTGCATGGGATGAACTCCAAAAAGCTGCCAAAGAGAAGAAAACAAGACCATTTTATCGGGCTGTGAATAAACACCGTTTAATGTATGCAGGTGGACTTGATGAACCTGTACAGCGACCTTATATAGATCGAGATTGGCGGTTTGGCCATTACCAGATGGAAGGACTCCAGGATCACTTGAGCCGCTTCTCAAGATTCATTATTCGACCGTTCTCCCTCAAAAGGAAAACAAAATCTCAAGAAAAGAATGCCAAATTAATTCTTCAGCCTCTTGAAAGTTAG 1893 0.4654 MTLVGLFLTATKLAGALLTLTVAANAFSYSRFRNKNLRRFRSPIDESSNTLADFNVAEEENGFFFGLATAPAHVEDRLDDAWIQFAEEKSGDSQGRRTVDAVMGSASSDGGSQRAATSPRGRKPLKVAMEAMIRGFEKYLEVEAKEGEEEPRPNVTAWHNVPRPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWTRIMPVEPVNSLNESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVNSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHELSNPVNPIVGVAHHVSFMRPYGLYDITAVSLANSLTLFPYIDGISEKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYRHLNIPFIITENGVSDETDLIRRPYLLEHLLAVYAAMIMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKITREDRESAWDELQKAAKEKKTRPFYRAVNKHRLMYAGGLDEPVQRPYIDRDWRFGHYQMEGLQDHLSRFSRFIIRPFSLKRKTKSQEKNAKLILQPLES 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02908 630 ProSitePatterns Glycosyl hydrolases family 1 active site. 442 450 IPR018120 -
Spst3g02908 630 Pfam Glycosyl hydrolase family 1 175 360 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 Pfam Glycosyl hydrolase family 1 382 528 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 SUPERFAMILY (Trans)glycosidases 157 534 IPR017853 -
Spst3g02908 630 PRINTS Glycosyl hydrolase family 1 signature 454 465 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 PRINTS Glycosyl hydrolase family 1 signature 499 511 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 PRINTS Glycosyl hydrolase family 1 signature 385 399 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 PRINTS Glycosyl hydrolase family 1 signature 442 450 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 PRINTS Glycosyl hydrolase family 1 signature 475 492 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 PANTHER GLYCOSYL HYDROLASE 124 375 IPR001360 GO:0004553|GO:0005975
Spst3g02908 630 Gene3D Glycosidases 136 540 - -
Spst3g02908 630 MobiDBLite consensus disorder prediction 89 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02908 Spst-Chr3 78739581 78745034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02908 6 627 Glycoside Hydrolase AT3G06510 62.048 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02908 K21362 - gmx:100792401 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02908 3 78739581 78745034 Spst3g02908 3 78739581 78745034 ECH