Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02905 ATGGTGTTGGCTTCCCCAAACCCAATAAGGAGCGAAGGGATTCTCCGCAGAGAGATTCCCGTGGTGGACCTCTCAGGGGAGAGGTCAGAAGTGGCAAAGCTCATCGTCAAAGCCTGCGAAGAATACGGTTTCTTCAAAGTCATAAACCACGGTATCAGCAACCAAGTTATTGCCAAGACTGAAGAAGCAGGGTTTGGTTTCTTTGGGAAACCGGTGTTGGAGAAGAAGGTGGCGGCACCTGCATACGGGTGCAAGAACATAGGTGTCAATGGAGACATGGGTGAGGTTGAGTACCTTCTCCTCAGTGCCACCACTCACTCCATTTCTCACATATCCAAAACTATATCCACTGACCCATTAAACCTCAGCAAAACCTTGAGTGCATACACAGAAGCAGTGAAGGAGCTGGCATGTGAGATATTGGAGGTGATGGCAGAGGGGCTGGGGGTCCCGGACACTTGGGTTTTCAGCAGATTGATAAGGGATGATGAAAGTGACTCAGTGCTGAGACTCAATCACTACCCACCTATAATTAACAGAGAGAGTTGCAAGGAGAAGGACAAAGATAAGGACAAGTCATCACAATTTAGCAAGGTTGGGTTTGGGGAGCATTCTGACCCTCAGATTCTCACCATTCTCAGATCCAACGACGTGGGTGGCCTCCAGATTTCTCTTCCAGATGGGGTGTGGATCCCAGTCACCCCTGACCCCTCTGCATTCTATGTGAACGTGGGTGATGTACTACAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGGCACAGGGCTATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCTCTGCATGCTACCATTGTTGCTCCCTCAGTTATGGTCACACCTCAGAGGCCTTCTCTCTTCCGACCCTTCACTTGGGCAGAATACAAGAAAGCCACTTACTCTCTCAGGCTTGGAGACACACGCATTCAGCTTTTCAGAAACTGCAAACACTAA 996 0.489 MVLASPNPIRSEGILRREIPVVDLSGERSEVAKLIVKACEEYGFFKVINHGISNQVIAKTEEAGFGFFGKPVLEKKVAAPAYGCKNIGVNGDMGEVEYLLLSATTHSISHISKTISTDPLNLSKTLSAYTEAVKELACEILEVMAEGLGVPDTWVFSRLIRDDESDSVLRLNHYPPIINRESCKEKDKDKDKSSQFSKVGFGEHSDPQILTILRSNDVGGLQISLPDGVWIPVTPDPSAFYVNVGDVLQVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRIQLFRNCKH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02905 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 312 - -
Spst3g02905 331 FunFam Gibberellin 2-beta-dioxygenase 2 4 317 - -
Spst3g02905 331 Gene3D - 5 317 IPR027443 -
Spst3g02905 331 SUPERFAMILY Clavaminate synthase-like 17 320 - -
Spst3g02905 331 PRINTS Isopenicillin N synthase signature 240 266 - -
Spst3g02905 331 PRINTS Isopenicillin N synthase signature 35 52 - -
Spst3g02905 331 PRINTS Isopenicillin N synthase signature 204 225 - -
Spst3g02905 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 280 IPR005123 -
Spst3g02905 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
Spst3g02905 331 Pfam 2OG-Fe(II) oxygenase superfamily 166 278 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02905 Spst-Chr3 78719776 78723069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02905 8 327 Glycosyltransferase AT5G59530 28.024 3.93e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02905 K04125 - gmx:100816206 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02905 3 78719776 78723069 Spst3g02905 3 78719776 78723069 ECH