Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02873 ATGCTCCAACGGCCTTCTTCTCCTCCTCACGCGATCTCTTCTCCGTTTTGCATGGGTCTTGAACAACCGCGTTCACCTCTTCCCAATTTTGGATTCTCGTATAACCGAACTTTCTCTGCTTCAGAAACTTCTTCTTTCTTGGGGACCAAAATGATTAACAAAACACTTTTCTTCACTTATTTATACTTGTTTGCCTACATTTTACTTTCTTCTGGAGTCATTTTGTACAACAAGTGGGTTCTGTCTCCAAAGTACTTTAACTTTCCGCTTCCTATAACACTCACCATGATTCACATGGGCTTTTCTGGGGCAGTGGCATTTTTTCTTGTCCGGGTCTTTAAGGTCGTATCTCCTGTCAAAATGACATTTGAAATATATGCAACTTGCGTGATACCAATAAGTGCCTTCTTTGCTTCAAGTCTTTGGTTTGGTAACACAGCTTATTTGCATATTTCTGTGGCCTTCATCCAGATGCTCAAAGCTCTAATGCCTGTGGCAACATTCCTCGTGGCTGTCATTTGTGGCACTGACAAAGCAAGGTGTGATGTGTTCTTCAACATGCTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTACGGAGAAATTCATTTTAATGTAGTTGGTACAGTTTACCAGGTCACCGGCATCTTTGCTGAAGCTTTAAGACTGGTCTTAACACAAGTCCTTTTACAGAAGAAGGGCTTGAGTTTAAATCCTATCACAAGCTTATATTACATAGCTCCATGCAGTTTTGTGTTTCTCTTCGTGCCTTGGTACCTGCTGGAACAGCCCGTGATGGAAGTTTCACAGATTCAGTTCAACTTTTGGATCTTCTTTTCCAATGCTCTGTGTGCTCTAGCCTTGAATTTTTCCATTTTCTTAGTAATTGGTAGAACCGGTGCCGTAACCATCAGGGTTGCTGGAGTGCTTAAAGACTGGATATTGATAGCCCTTTCTACCGTTATATTTCCAGAGTCAGCAATAACATGGCTGAATATAATTGGTTATGCTATTGCACTATGTGGAGTTGTGATGTACAATTATATTAAGGTTAGGGATGTCCGAGCCTCTCAATCACCTGCTGAAATTATTCCCGATCGAATGACAAAGGACTGGAAATTCGAGAAGAGGTCATTTGACTTTTATGTGCCAGATAATGTTAGTAACGATGGGGGAAGTGGTGGAGGCAATGGTTCTCTTTCTGATATGAACATTGATGAAGAAGCACCGCTAATTTCTTCATCAAGGGTGTCTCATATTGGACGCATGCAGCTAGCCAATCATGCAACTGGAAAATGA 1299 0.4165 MLQRPSSPPHAISSPFCMGLEQPRSPLPNFGFSYNRTFSASETSSFLGTKMINKTLFFTYLYLFAYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFFLVRVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLVAVICGTDKARCDVFFNMLLVSVGVVISSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLLQKKGLSLNPITSLYYIAPCSFVFLFVPWYLLEQPVMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESAITWLNIIGYAIALCGVVMYNYIKVRDVRASQSPAEIIPDRMTKDWKFEKRSFDFYVPDNVSNDGGSGGGNGSLSDMNIDEEAPLISSSRVSHIGRMQLANHATGK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02873 432 PANTHER SOLUTE CARRIER FAMILY 35 60 353 - -
Spst3g02873 432 Pfam Triose-phosphate Transporter family 61 347 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02873 Spst-Chr3 78246301 78249507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02873 50 429 Organic Solute Cotransporters AT3G17430 82.632 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02873 - - gmx:100798271 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02873 3 78246301 78249507 Spst3g02873 3 78246301 78249507 ECH
Spst3g02873 3 78246301 78249507 Spst9g02749 9 61709376 61713313 PCT