Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02864 ATGGAGAAAGATTCCTTTTGCTTACAGACCCCTCTACCAATGACGGACTATTCGCCAAGAAAATTCATCAGAGAAATGAGAGATACTAAGGAGTCAAGTGATGTTAGTGACAATAACATGAAGGTTTCTGTAGAAGAGCAAAGACACAGTGAAATAGCTGAAGGAACCAATCTAGACCAGTTAACAAATGAGAAAACACAAGCTACAGTGAGTGGGACAGTGGCAACACCTCAGAACACCTGCACCACTAACCTTAGGGGGGTCTTCGCCGTCCGTGGCAGCCATGCTTCGGCTGCGGTGGTGCCCAGCGACAACAAGTGCTTTAAAACCGCAGCTTTCATCAGACTCACTTCTCACGGCGTGAATTTGAAGGTGCCCAAGACTTTGAAACCTTGTTGTTGCAGTGCTGATTCAAAGTCTGACTTTTTCTCCGTGACGCCGTCGTACAACTCCGATGTGGACTACCTCGGGGAAAGCACCAAAGGTGATTTGAACGTCAAATTGGAGCATCTTGAGGCTTTCGGAATTGATGGTCATTCTGCTTTAAAAGGTCCAATTGAGGAAGTGGCCAGATCAGAAGCAAGACAAGCACAGGATTTGCTAAAAGATTTGGGCATTCCGAGCCCTTATTCATCCAGAAATTCGCCTCGTGGAATATTCTGCAGCCGTACATTGAATCTGCGGTCCATCAGTGCCATTGGATATGATATGGACTATACCTTGATTCATTACAATGTGATGGCTTGGGAAGGCAGGGCTTATGACTACTGTATGGAAAACCTTAGGAATATGGGCTTCCCTGTTGATGGACTTGCCTTTGATCCTGATCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAAAGGAAATTTGGTTAAAGCTGATCGATTTGGTTATGTTAAAAGAGCCATGCATGGCACCAAAATGTTATCTACGCGTGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAAGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCCGTGTCTGAAGCTGTGGCCTATATGCAGATGGTTGACAGATTGGATGATGGGACTATACCAGCGGATCTTGGCCCTCTTGATTATAAAGGACTATATAAGGCTGTTGGGAAAGCTCTGTTCTGGGCCCATGTTGAAGGTCGCCTTAAGAGCGAGATAATGTCCAAGCCTGAACTTTTTGTGGAGCCTGATCCAGAATTACCTTTGGCACTTTTGGATCAGAAGGAGGCTGGTAAAAAACTTCTGCTAATTACCAACTCAGATTATCATTACACAGACAAAATGATGCGCCATTCTTTTAATAGATTCCTTCCCAATGATATGGGTTGGCGAGATCTATTTGACATTGTAATTGTCTCAGCAAGAAAACCAGAGTTCTTTCAAATGTCACACCCCATGTATGAAGTGGTCACAGGCGAGGGGCTTATGCGTCCATGTTTCAAGGCTCAAACTGGTGGTTTGTACTCAGGGGGATGTGCACAAATGGTTGAAAATTCTCTAGGTATTCATGGAGATGAGATATTGTATGTTGGGGACCATATTTACACTGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTAGAGAACTGGAAGAAGAGTACAATGCCTTGATTGGTAGCCGGAGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTTGTAGGGGATCTCTTTAACCAACTTCGGCTGGCTCTGCAAAGGCGTAGCAGAGACCGTCCTGCTCAAACCCTTGCAGCAACTAACATGAATGATGAAGACCTCACCGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATAAGAAAATTGCTCCGATGCTGGAGGCAGACGGGGAGCTCTTTAATACAAGGTGGGGTTTTCTATCTCGTGCTGGACTATGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCCGATATTTATACATCTAGGGTGTCAAACTTTTTGAATTATACTCCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCGTACACATACTATTGTTCTCAAGTTAATAATCAGCGTGCTTCCTAG 2106 0.4411 MEKDSFCLQTPLPMTDYSPRKFIREMRDTKESSDVSDNNMKVSVEEQRHSEIAEGTNLDQLTNEKTQATVSGTVATPQNTCTTNLRGVFAVRGSHASAAVVPSDNKCFKTAAFIRLTSHGVNLKVPKTLKPCCCSADSKSDFFSVTPSYNSDVDYLGESTKGDLNVKLEHLEAFGIDGHSALKGPIEEVARSEARQAQDLLKDLGIPSPYSSRNSPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVMAWEGRAYDYCMENLRNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYVKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPADLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMRHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQMSHPMYEVVTGEGLMRPCFKAQTGGLYSGGCAQMVENSLGIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGSRSYRESLVELINQKEVVGDLFNQLRLALQRRSRDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDKKIAPMLEADGELFNTRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLNYTPFMYFRSQEQNLAHDSYTYYCSQVNNQRAS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02864 701 FunFam Haloacid dehalogenase hydrolase 378 569 - -
Spst3g02864 701 CDD HAD_cN-II 220 542 - -
Spst3g02864 701 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 211 686 IPR008380 -
Spst3g02864 701 SUPERFAMILY HAD-like 216 688 IPR036412 -
Spst3g02864 701 Pfam 5' nucleotidase family 219 687 IPR008380 -
Spst3g02864 701 NCBIfam HAD-IG family 5'-nucleotidase 219 559 IPR008380 -
Spst3g02864 701 Gene3D - 382 569 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02864 Spst-Chr3 78181286 78195166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02864 - - vun:114174902 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02864 3 78181286 78195166 Spst3g02864 3 78181286 78195166 ECH
Spst3g02864 3 78181286 78195166 Spst9g02753 9 61760468 61780662 PCT