Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02855 ATGAAGCATAAAAAGCCATCTTCACCAACCACTGCAAGAACTGCGTTGAAGAAGCAAGGTGACAACAACAAGTCCCTGCAGAGTCCAACGCAGCCGCGACTCAGAGCTTCTCCCAAGGCTCCAAAGTCGCCACCAGAGTCATCATCAACCAGAGCTAAGTCAGTGCCCCCAGACTTGAAGGACGTTTCAAGGGCCAAAAGGGGTGCTGTTGTGGGGTCTCAAAAGGGTAGGGAAGCTGAGGAAGCTAAGGTTGTTGTTGTTGCTCGGCCACGGCGAAGGCTTGGGGATTTTGGTTTGAGGAAGAGTGAAGATGATGATCCTTATAGGATGAAGAAGAACAAGGAGTTGCAGGAGAAGCTTGACGTGAGTGAGAATTTGATCAAGAGTTTGCAATCTGAGGTGCTTTCGTTGAAGGAGGAATTGGATAAAGTTAAGAGCTTGAATGTGGAGCTTGAGTCTCAGAACACAAAGCTAACTCAGAGCCTTGCTGCCGCTGAAGCTAAGGAAGCAACTGTTGGCACTGGCCACAGTGAAAAGAAGGAGTCAATTGGAGAACACCAGAGTCCCAAGTTTAAAGACATACAGAAACTCATTGCTGACAAATTGGAACTGTCTAGAGTAAAAAAGGAAGGTACTCCTGAAGTAATTTTTGCTAAAGCATCAATTCGTTCACCAACCCCGAGTTTTGCCCTCCATGACACTACAAGTATAGGAAGAAAAGCTCCACCCAATACATACCTACAGCCACCTCCACCTCCACCACCACCACCACCAATTACAAGTGTAGGAAGAAATTCTCTGACCAACGCATGCCTGCAGCCCCCTCCGCCGCCGCCGATTCCATCTTGGCCTTCAGCAAGATTAGGTAACACCCAAAAGGCCCCTGCAGTTGTTGAACTATTTCACTCCTTGAAGAATAAAGATGGGAAGATAGACTCAAAAGGATCCGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTGGGAGAAATTCAAAACCGTTCAGCTCACCTCTTAGCAGTAAGCTTTGCATTGAATGTGATTTTAACTTTGAGATGCGTACTACTATTTAATGAAAGAGTAATAGCTGACCATCCTTTCCAGATAAGGACTGACATTGAAACAAAAGGAGAGTTCATTAATGACCTCATCAAGAAAGTAGTAGCTGCAGCTTTCACGGATATTGAAGAGGTCCTAAAGTTTGTTAATTGGCTTGATGCAAAACTATCATCATTGGCTGATGAGCGTGCTGTCTTGAAGCATTTTAAGTGGCCTGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCATGAGCTTAAAATGTTAGAACAGGAAATTTCCTGCTACAAGGATGACCCTGACATTGCATGTGGAGCTGCCTTAAAAAAAATGGCCAGCCTATTAGACAAGTCTGAGAGGAACATACAGAGGTTAATCAAGCTACGAAGTTCAGTCATACATTCATATCAAGGGTTCAACATTCCAACTGAATGGATGCTTGATTCTGGAATAATGAGCAAGATAAAGCAGGCTTCCATGACTCTGGTCAAGACATACATGAAACGAGTGTCAATGGAGCTTGAATCCAGTCGCAATTCGGACAGAGAATCTAATCAAGATTCTCTTTTACTTCAGGGTGTGCATTTTGCATATAGGGCTCATCAGTTTGCTGGAGGATTGGACTCAGAAACAATGTGTGCTTTTGAAGAGATAAGACAACGTGTACCACGACACCTAGCAGGGTCTCGAGAACTTCTGGCTGGCATACCATAA 1794 0.4448 MKHKKPSSPTTARTALKKQGDNNKSLQSPTQPRLRASPKAPKSPPESSSTRAKSVPPDLKDVSRAKRGAVVGSQKGREAEEAKVVVVARPRRRLGDFGLRKSEDDDPYRMKKNKELQEKLDVSENLIKSLQSEVLSLKEELDKVKSLNVELESQNTKLTQSLAAAEAKEATVGTGHSEKKESIGEHQSPKFKDIQKLIADKLELSRVKKEGTPEVIFAKASIRSPTPSFALHDTTSIGRKAPPNTYLQPPPPPPPPPPITSVGRNSLTNACLQPPPPPPIPSWPSARLGNTQKAPAVVELFHSLKNKDGKIDSKGSVNHQRPVVISAHSSIVGEIQNRSAHLLAVSFALNVILTLRCVLLFNERVIADHPFQIRTDIETKGEFINDLIKKVVAAAFTDIEEVLKFVNWLDAKLSSLADERAVLKHFKWPEKKADAMREAAVEYHELKMLEQEISCYKDDPDIACGAALKKMASLLDKSERNIQRLIKLRSSVIHSYQGFNIPTEWMLDSGIMSKIKQASMTLVKTYMKRVSMELESSRNSDRESNQDSLLLQGVHFAYRAHQFAGGLDSETMCAFEEIRQRVPRHLAGSRELLAGIP 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02855 597 MobiDBLite consensus disorder prediction 168 188 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 57 110 - -
Spst3g02855 597 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 24 584 IPR040265 -
Spst3g02855 597 MobiDBLite consensus disorder prediction 227 242 - -
Spst3g02855 597 Coils Coil 113 168 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 1 110 - -
Spst3g02855 597 SUPERFAMILY Formin homology 2 domain (FH2 domain) 406 476 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 172 188 - -
Spst3g02855 597 Coils Coil 432 452 - -
Spst3g02855 597 Coils Coil 468 488 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 227 280 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 8 34 - -
Spst3g02855 597 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02855 Spst-Chr3 78059691 78065419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02855 - - gmx:100820135 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02855 3 78059691 78065419 Spst3g02855 3 78059691 78065419 ECH
Spst3g02855 3 78059691 78065419 Spst9g02755 9 61786995 61790697 PCT