Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02818 ATGTTTAGATTAAAGAATTGTGAATGCCTGGTGCGGTTATTCTATCAGCAAACCCGGCATTACCCTCACCACAACAATCTTATGGCTTATTTAGTAGGTTTTGATCCTTACTCCCACTTGACCAAGGCCTTTTCTCAGTACCCTTCTCTTTCTTCTTCTGATCGTGGTTGCTACCTGTCTTTCCCACTTCTCCATAAACTTGTTTATGCTAATGTTTTTGGGGTTAGAAGAAGCATTGGTTTTGGTCCTAGAGGTTGTAGCTATGACACTAGTGGTAGTTGTAATCCTAATACTGATAGGATCTTTGTGAAAGCTAAGACCATGTCTCGTGGCTTTGCCTCGAATCGTCGCCAGCCGATGTTGGCTGATTTGGAGCAAAGGAATTCTGTTAAGAGTGATGAATGTGATGCAACTTTGGTTAAGATTGACAATGGATCTATAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCGCCGATTATCCCCGAAACTTGTAGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTCGTGTCAGCTCTCAATAAGTTCATCGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTTTGTAAGATATGGAATTGTTCACGTGATGAAGCTGATATACGTGTTCATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCAGTTGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGACAGAATGCAATTAAGGATCACACAATCGAGTGGATAGAGAAGAATTTTCCAGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATTGATGATAATCCGCGATATGCTATAGAGTGTGCTAATGTTGGAATTAAAGTCCTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGACCGAGTCCGTTGATGAGCACCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTGGAACAACAGTTAATGTCATTGATAGCTTCGTAG 1107 0.4002 MFRLKNCECLVRLFYQQTRHYPHHNNLMAYLVGFDPYSHLTKAFSQYPSLSSSDRGCYLSFPLLHKLVYANVFGVRRSIGFGPRGCSYDTSGSCNPNTDRIFVKAKTMSRGFASNRRQPMLADLEQRNSVKSDECDATLVKIDNGSINGSPAKPPCFNDRRLSPKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQLALQKLSRFCSLSVVTSRQNAIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECANVGIKVLLFDYENSYPWCKTESVDEHPLVTKVKNWEEVEQQLMSLIAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02818 368 PANTHER NUCLEOTIDASE YQFW-RELATED 80 367 - -
Spst3g02818 368 SUPERFAMILY HAD-like 161 363 IPR036412 -
Spst3g02818 368 Gene3D - 215 365 IPR023214 -
Spst3g02818 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 361 IPR010708 GO:0008253|GO:0009264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02818 Spst-Chr3 77726617 77729793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02818 - - gmx:100793947 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02818 3 77726617 77729793 Spst3g02818 3 77726617 77729793 ECH
Spst3g02818 3 77726617 77729793 Spst9g02770 9 61894011 61897330 PCT