Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02770 ATGACTGCGAAGACAAACACGATGCCAATCATTGGCAAACTGCACTGTTCGTCGTCTCAGACGGTGCATGTGGTGAGGAAGAGGCCACACGTCGTGAATGGCGGGGGTTTTGTAGTCATGGATTCTAGTGCCCAGAGGGTTGTGTTCAGGGTCGATGGTTGTGGTGTTCGTGGCAAAAAGGGAGAGTTGATCCTAAGAGAAGGAGACGGAGACGCTTTGCTCCTCATGCGTCGGAAGGGAGGCATGGTTGAGGCCTTGAGCATTTACAAGAAGTGGAAAGGTTACAGTTTAGACTACGAAGGGTCACGGAAGCTGGTTTTCAGCTTGACAGAACCCAATTCTTGTTTGGTTAAGAACAAGGCAATCAGAATCTCCACTAGAAACAGCGGCTGTGACTTTAAGATCAATGGCTATTTTCCGGACAAGTGTTGTAGCATTATTGACTCTAAAGGCAACGAGGTAGCACAGGTGAGGGTGATGAAGGAAGTGGAGGAATTCATGGTAAACAAGGATTTGTATCACGTGGTGGTGGAACCGGGGATGGATCAAGCTTTTGTTTTTGGAGTCATAGCTATTCTTGATTACATTTATGGGGAATCCACCCACTGCTAA 612 0.4739 MTAKTNTMPIIGKLHCSSSQTVHVVRKRPHVVNGGGFVVMDSSAQRVVFRVDGCGVRGKKGELILREGDGDALLLMRRKGGMVEALSIYKKWKGYSLDYEGSRKLVFSLTEPNSCLVKNKAIRISTRNSGCDFKINGYFPDKCCSIIDSKGNEVAQVRVMKEVEEFMVNKDLYHVVVEPGMDQAFVFGVIAILDYIYGESTHC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02770 203 PANTHER - 22 198 IPR007612 -
Spst3g02770 203 SUPERFAMILY Tubby C-terminal domain-like 8 197 IPR025659 -
Spst3g02770 203 Gene3D - 9 201 IPR038595 -
Spst3g02770 203 Pfam LURP-one-related 11 192 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02770 Spst-Chr3 77252454 77253414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02770 - - gmx:100306504 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02770 3 77252454 77253414 Spst3g02770 3 77252454 77253414 ECH
Spst3g02770 3 77252454 77253414 Spst9g02814 9 62384075 62385159 PCT