Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02703 ATGTCGATTTTGGAGAGGTTTATCTTGAATGTTTTGATTGAAATTCCCATGTTTCGTCGCCCTGCACTAATGTTCCCTGTTACATTACTTTCTTTCCAGATCAAAACTATAAAAGTCAGTAATGTTTCCTTGGAAGCAAATGTGCAAGACATTAAGGAGTTCTTTTCCTTTTCTGGTGATATTGAATATGTTGAAATGCAGAGTCATGATGATGGACGAACTCAAACTGCCTTTGTTACCTTCAAGGATTCACAAGGCGCGGAGACTGCAGTATTATTATCGGGAGCAACAATAGTTGATCTGTCCGTGAAAATAGCATTGGATCCAGATTACAGGATTCCACCTTCTGCCTTGGCATCATCTGAAACAGAGAATAAAACTCCTGGTGGTGCTGAATCTGCTTTAGGGAAGGCAGAGGATGTGGTCACCAGCATGCTTGCCAAGGGTTTTATCTTAGGGAAGGATGCTGTCAACAAAGCAAAGACTTTTGATGAAAAGCACCAGTTATCTTCAACAGCTTCAGCAAAAGTTACCTCTTTTGACCAAAAACTTGGGCTTAGTGAGAAAATAAGTGTCGGTGCTTCTGTTGTGAGTGATAGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCAGAGAAGACCAAATCAGCATTTGCCGTTGCAGAACAGAAAGTCAGTACTGCAGGGTCTGTTATAATGAAGAATCGATATGTACTGACTGGGACTACCTGGGTAACAGGTGCTTTTAATAAGGTTGCCAAGGCAGCTGGTGATGTTGGACAGAAGACAAAAGAGAAAGTGGTAAATGCAGAAGAGGAACAGAAGCGGAAAGTTGAAGAGCAGTATGCACAGGTCCTTTCTGACTCCCCAATGGCAGCTGCAAGACACGATCTGCACTCTTCCAAGGCTGCTCCTGCCCAGGGTTTGATCCTCTGA 936 0.4284 MSILERFILNVLIEIPMFRRPALMFPVTLLSFQIKTIKVSNVSLEANVQDIKEFFSFSGDIEYVEMQSHDDGRTQTAFVTFKDSQGAETAVLLSGATIVDLSVKIALDPDYRIPPSALASSETENKTPGGAESALGKAEDVVTSMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVTSFDQKLGLSEKISVGASVVSDRVREVDQKFQVSEKTKSAFAVAEQKVSTAGSVIMKNRYVLTGTTWVTGAFNKVAKAAGDVGQKTKEKVVNAEEEQKRKVEEQYAQVLSDSPMAAARHDLHSSKAAPAQGLIL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02703 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 108 IPR000504 GO:0003723
Spst3g02703 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 98 IPR000504 GO:0003723
Spst3g02703 311 SUPERFAMILY RNA-binding domain, RBD 33 108 IPR035979 GO:0003676
Spst3g02703 311 Coils Coil 261 288 - -
Spst3g02703 311 SMART rrm1_1 36 106 IPR000504 GO:0003723
Spst3g02703 311 Gene3D - 33 106 IPR012677 -
Spst3g02703 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 35 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02703 Spst-Chr3 76529213 76532618 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02703 - - gmx:100809613 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02703 3 76529213 76532618 Spst3g02703 3 76529213 76532618 ECH