Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02690 ATGGCACTCAGCAACAATGTGATAGGGGCCATCAACTTCGTTGCAGTGCTTCTCTCAATTCCTATCATTTCTGCAGGGATCTGGCTAACAACAGAGCCAGCAGATTCGTGCGTCAAAATTCTACAATGGCCTGTGATAATCTTGGGGGTTCTGATACTTGTAGTGGCTCTGGCAGGGTTTATAGGATCCTTTTGGAGGAACCCTTGGCTTCTCGTGTTCTACCTGGTTGCCATGCTTGTGCTTATTGTGTTGCTGGTTAGCTTGGTGGTTTTCACGTATGCTGTCACCCTTAGAGGGCATGGGAACATTGAACCCAATCGCTCCTACTTGGAATATCGTATCGATGATTTCTCACTTTGGCTTCGTCGAAGAGTAAGAAGCTCCAACAAATGGGATAACGTTAGAAGGTGTCTTATGTCATCAAATATATGTGCTGACTTGAATCAACGCTATCGAACCGCGCAGGACTTCTTTAATGCACACCTAACCCCCATTCAGTCAGGGTGCTGCAAGCCCCCAACAAAATGTGGTTACACGTTTGTGAACCCAACGTATTGGATTAGCCCCATCAACACGGCAGAAGACATGGATTGCATGAAATGGAGCAACGACCAAGCACAACTTTGCTACAACTGTGACTCATGCAAAGCTGGTTTGTTGGCAACCCTTAGAGTGGAATGGAGAAGGGCCAATGTGATATTGATCGTCACTCTAGTTGCTTTGATCGCAGTGTATATGGTAGGGTGCTTTGCCTTTAGGAATACCAAAACGGAGGAGCTCTTTCGCAAATACAAGCAAGGCTACTCTTGA 810 0.4617 MALSNNVIGAINFVAVLLSIPIISAGIWLTTEPADSCVKILQWPVIILGVLILVVALAGFIGSFWRNPWLLVFYLVAMLVLIVLLVSLVVFTYAVTLRGHGNIEPNRSYLEYRIDDFSLWLRRRVRSSNKWDNVRRCLMSSNICADLNQRYRTAQDFFNAHLTPIQSGCCKPPTKCGYTFVNPTYWISPINTAEDMDCMKWSNDQAQLCYNCDSCKAGLLATLRVEWRRANVILIVTLVALIAVYMVGCFAFRNTKTEELFRKYKQGYS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02690 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Spst3g02690 269 PRINTS Transmembrane four family signature 38 64 - -
Spst3g02690 269 PRINTS Transmembrane four family signature 6 29 - -
Spst3g02690 269 PRINTS Transmembrane four family signature 65 93 - -
Spst3g02690 269 Pfam Tetraspanin family 6 249 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02690 Spst-Chr3 76384974 76386413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02690 1 269 Miscellaneous Gene Families AT5G46700 68.401 6.48e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02690 - - gmx:100789266 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02690 3 76384974 76386413 Spst3g02690 3 76384974 76386413 ECH
Spst3g02690 3 76384974 76386413 Spst3g02690 3 76384974 76386413 PCT