Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02588 ATGGAAACAGCAGTGGTGGTGCACTTTCTTTGCTATTTTTTCATACCAATTTGTTGGTGCAGTGGCAACATAGTGCAGGCTATTGAATTACCTAAGTACACATTGATGCTGTCTGAATCAGATTTTCAGATTAGACTCTACAATGAATCCACATGGATATCAGCCCATGTTTCTGGAACTTCCTTCTACCAGTCCTACAAAACTGGATTTCAAAGGCTATACCAATATATCCATGGTGCGAATTCGAATTCTTCAAAAATGGCATTTACTGCTCCAGCCTTAACAAGTGTGCCCTCGTCATCATCAGCCGTTGGGGATGGCTATATTGTAAGAATGTTCATATCAACTCGGTTTCAGGGGAAACCTCCGCTGCCGAATCCTGAACTGAAGCTGCGGATAGAGAAGTGGAAAACTCAGTGCATAGCAGTTAGGAAGTTCAGTGGGTATGCCAATGATGATAACATTAATAAAGAGATCGAAGCACTTTTAACTACCCTAAACAACCATTCGTTAACAATACAAGATACGGACTACATCATATTGGAATAA 549 0.4062 METAVVVHFLCYFFIPICWCSGNIVQAIELPKYTLMLSESDFQIRLYNESTWISAHVSGTSFYQSYKTGFQRLYQYIHGANSNSSKMAFTAPALTSVPSSSSAVGDGYIVRMFISTRFQGKPPLPNPELKLRIEKWKTQCIAVRKFSGYANDDNINKEIEALLTTLNNHSLTIQDTDYIILE 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02588 182 Gene3D Regulatory factor, effector binding domain 27 182 IPR011256 -
Spst3g02588 182 PANTHER HEME-BINDING PROTEIN-RELATED 26 176 IPR006917 -
Spst3g02588 182 FunFam Heme-binding protein 2 28 182 - -
Spst3g02588 182 Pfam SOUL heme-binding protein 29 176 IPR006917 -
Spst3g02588 182 SUPERFAMILY Probable bacterial effector-binding domain 19 178 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02588 Spst-Chr3 74314765 74315554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02588 - - gmx:100500604 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02588 3 74314765 74315554 Spst3g02588 3 74314765 74315554 ECH