Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02581 ATGGCATCATGCAACAACACCACCGTTCAGGACCAAAGAGAAACACCCATACACCAAGACATCTTAGAGACCGTATTCTCTTACGTGCCACTCATCCACCTCGTCTCAGCTTCTCACGTGTCACATGCCTGGAGCCGTGCGGTCTCCACCTCCCTCCGCCACGTCAACCCCATCAAACCCTGGCTCACGCTGCACTTCCAGAACCGCCGTGCACCGCACCTCATCAACACCTTCGCCTACGACCCACGCTCCCGCGCCTGGTTCCAAATTCACGCGCCGCATCCCACCCACACTTCTGCGCTACGCGCGTCGCACTCCTCACTCCTCTACACGCTCTCTCCCAGTGAGTTTGCCTTCTCCCTTGACCCCCTGCACCTCCACTGGCACCACGCGGTCCCCCCTCGCGTCTGGCGTATCGACCCCATCGTCGCGCGCGTGGGAGCCCGCATCGTGGTAGCGGGAGGCGCGTGCGACTTCGAGGACGATCCCCTGGCGGTGGAGATCTACGACACGGAGTCCCGCACGTGGACCCGGTGCCAGTCGATGCCGGCGATTCTGAAGGACTCCTCAGCTTCCACGTGGCTCTCGGCGGCCGTCGCCGGAGAGAGGATGTACGTGATGGAGAAAAACTCCGGCGTGACTTACTCGTTCGATTGCAACACGATGACGTGGCAGGGCCCGTTGGAGCTGCGTCCGAATCGAAGCGTTTTCCACTGCGTGATCGGAGCGATACGCGGTGGTTTAATGGTGGCGGGGATGGTGGGGGAGGCGGAGAACGTGAAGGAGGTGAAGTTGTGGGAAGTGAAATGGGGAGAAGCGTTGGGGAGTGAATTAGGGCATTGGTGTGAAGAGTTAACCACGATTCCGAAGGAGATGACGGTGAAGATTATGGGTGAGGGTGGGGGTTCCATTGAGGTGAACTGGATTGGGAATTCTGTGTATTTTCAGAATCGTAGAGAACCGGAGGAGATTGTTGTGTGCGAGGTTGCGAGTGGCGGAGGGTGTGAGTGGGAGAGCGTGAGCAACGTGACCGTGAGTGATGTGAGTCGCATGGGGAGAACAGTGTTTTGCGGAGCCCATGTGGGGCTTGAAGACTTGAAGAGGGCGATCAAGAAAAATTGTGTGTTTGTGGAAAAAGTAACAGATAAATTTAAGGATGGGTAA 1164 0.5765 MASCNNTTVQDQRETPIHQDILETVFSYVPLIHLVSASHVSHAWSRAVSTSLRHVNPIKPWLTLHFQNRRAPHLINTFAYDPRSRAWFQIHAPHPTHTSALRASHSSLLYTLSPSEFAFSLDPLHLHWHHAVPPRVWRIDPIVARVGARIVVAGGACDFEDDPLAVEIYDTESRTWTRCQSMPAILKDSSASTWLSAAVAGERMYVMEKNSGVTYSFDCNTMTWQGPLELRPNRSVFHCVIGAIRGGLMVAGMVGEAENVKEVKLWEVKWGEALGSELGHWCEELTTIPKEMTVKIMGEGGGSIEVNWIGNSVYFQNRREPEEIVVCEVASGGGCEWESVSNVTVSDVSRMGRTVFCGAHVGLEDLKRAIKKNCVFVEKVTDKFKDG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02581 387 Gene3D - 64 276 IPR015915 GO:0005515
Spst3g02581 387 SUPERFAMILY F-box domain 20 70 IPR036047 GO:0005515
Spst3g02581 387 CDD F-box_SF 20 49 - -
Spst3g02581 387 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 17 308 - -
Spst3g02581 387 SUPERFAMILY Kelch motif 72 252 IPR015915 GO:0005515
Spst3g02581 387 Gene3D - 17 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02581 Spst-Chr3 74101262 74102425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02581 - - gmx:100799807 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02581 3 74101262 74102425 Spst3g02581 3 74101262 74102425 ECH
Spst3g02581 3 74101262 74102425 Spst3g02581 3 74101262 74102425 PCT