Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02579 ATGGTGGTAGTTGCATTATCCTCCTCTCTACCAGCCGGCAGAAACCTCTTCTCCTCCTTACCATCAACACCGCCTCTCCCCGACCGCACCGCCGCCGTCTCCGCCAGTCCACCGCCGCCAATCCCCGTCCCCAAGTATCCCCCTCCCCGTAAATCCCAAAAACCTCCTCAACCCCCGTCCCCGAACCCCGGTCTCAAATACCACCGCCACTCCAAGTACCACAAGCGCGTGCCGCGCGACGGCGTCGTCATCTCCGATGACGCAGACCGGTCCGTTATTATCGGTGAGTCCGGCGTATCGTACCTGCTCCCCGGCGCGCCGTTCGAGTTCCAGTTCAGCTACTCGGAGACGCCGAAGGCGAAGCCGATAGCGATCCGGGAGCCGGCGTTCCTGCCGTTCGCGCCGCCGACGATGCCGCGGCCGTGGACGGGGAAGGCGCCGCTGAAGAGTAAGAAAAAGAAGATTCCGCTGTTCGACTCGTTCAATCCTCCACCCCCCGGCACGAAGGGCGTGAAGCGTGTGGAAATGCCGGGGCCGTTTCCCGTGGGGCACTTCCCGAAAGAGGGCAAGACGAGGGAAGAGATTCTTGGGGAACCTCTGAAAAGGTGGGAGATACAAATGCTTGTTAAGCCCATGATATCTTATAATCGCCAAGTTAATCTTGGAAGGGATGGGTTAACGCATAACATGCTGGAATTGGTACATTCACATTGGAAGCGTAGCCGTGTCTGTAAAATTCGTTGTTTAGGTGTTCCAACTGTTGATATGGATAACGTTTGCCATCATATTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGCAGGTGGTATAGTGTACCTTTTCCGAGGCAGAAACTACAACTATAGGACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTACCCAAAGCTTATAGAAGATGCTCCAGGAGGACTAACGAAAGCTGAAGCTGATGAATTACGGATGAAGGGGAAAACCTTGTTACCAATTTGTAAATTAGCCAAAAATGGAGTGTATACATCCCTTGTAAAGGATGTTAGAGATGCTTTTGAAGGAAGTATTTTGGTGAAAGTTAACTGCAAGGGATTGGATCCTAGTGATTACAAGAAAATAGGTGCCAAACTCAAGGATTTGGTTCCTTGTGTGCTGTTATCTTTTGATGATGAACAGATATTGATGTGGAGGGGCAAAGACTGGAAATCAAGGTACCTGCAACCTGTTCCAATTTTTACACCTTCAAAAGCTGGTTTTACAGGGAATTCAGAAAATTCAGGTGAGATTGATGACAACCAAACTAAACATGACGGCAACAATAACAATGTGGTGAACTCAAGCCCAAAAATGTTGTCTCTGTGGAACCGTGCAATTGAGTCAAGCAAAGCTTTGTTGCTGGATGAATTTAATCTTGGACCTGATGCTCTCTTGGAGAAGGTGGAAGCATTTGAGATTGTTTCACAGGCGTTGGAGCACTCCCATCCTGCATTTAGTTTGTCATGTAAAGAAAATGGCTCTGAAGGTTCAACTGCAAGCTTTGAAAATAGCTCTTCTAGTGAAGACTTTCCCACTGAAGAAGACTATGGAAATGAGGATGAAGAGGATTATGATGACCACCATGATGATGCAGACCATGACTCGTATGATGTGGTGGACAGATCAGCTCAACCCGGATCATTAGGTGTTGATATGATTTTGAAAAGGCTAAAACAAATACCATTCGAGTAA 1740 0.4856 MVVVALSSSLPAGRNLFSSLPSTPPLPDRTAAVSASPPPPIPVPKYPPPRKSQKPPQPPSPNPGLKYHRHSKYHKRVPRDGVVISDDADRSVIIGESGVSYLLPGAPFEFQFSYSETPKAKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPVGHFPKEGKTREEILGEPLKRWEIQMLVKPMISYNRQVNLGRDGLTHNMLELVHSHWKRSRVCKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRAGGIVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIEDAPGGLTKAEADELRMKGKTLLPICKLAKNGVYTSLVKDVRDAFEGSILVKVNCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRYLQPVPIFTPSKAGFTGNSENSGEIDDNQTKHDGNNNNVVNSSPKMLSLWNRAIESSKALLLDEFNLGPDALLEKVEAFEIVSQALEHSHPAFSLSCKENGSEGSTASFENSSSSEDFPTEEDYGNEDEEDYDDHHDDADHDSYDVVDRSAQPGSLGVDMILKRLKQIPFE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02579 579 MobiDBLite consensus disorder prediction 505 559 - -
Spst3g02579 579 FunFam CRS2-associated factor 1, chloroplastic 199 294 - -
Spst3g02579 579 MobiDBLite consensus disorder prediction 31 63 - -
Spst3g02579 579 ProSiteProfiles CRM domain profile. 198 294 IPR001890 GO:0003723
Spst3g02579 579 Pfam CRS1 / YhbY (CRM) domain 318 401 IPR001890 GO:0003723
Spst3g02579 579 Pfam CRS1 / YhbY (CRM) domain 203 283 IPR001890 GO:0003723
Spst3g02579 579 ProSiteProfiles CRM domain profile. 316 412 IPR001890 GO:0003723
Spst3g02579 579 Gene3D - 318 413 IPR035920 -
Spst3g02579 579 MobiDBLite consensus disorder prediction 11 25 - -
Spst3g02579 579 MobiDBLite consensus disorder prediction 524 544 - -
Spst3g02579 579 Gene3D - 199 295 IPR035920 -
Spst3g02579 579 MobiDBLite consensus disorder prediction 505 523 - -
Spst3g02579 579 SMART CRS1_YhbY_2 200 283 IPR001890 GO:0003723
Spst3g02579 579 SMART CRS1_YhbY_2 318 401 IPR001890 GO:0003723
Spst3g02579 579 MobiDBLite consensus disorder prediction 1 80 - -
Spst3g02579 579 SUPERFAMILY YhbY-like 318 410 IPR035920 -
Spst3g02579 579 FunFam CRS2-associated factor 1, chloroplastic 317 412 - -
Spst3g02579 579 SUPERFAMILY YhbY-like 199 293 IPR035920 -
Spst3g02579 579 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 49 572 IPR044599 GO:0000373
Spst3g02579 579 MobiDBLite consensus disorder prediction 420 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02579 Spst-Chr3 74015428 74022915 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02579 - - gmx:100801953 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02579 3 74015428 74022915 Spst3g02579 3 74015428 74022915 ECH