Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02572 ATGGCAGAGAACAAGGACATCGAAACCGCCATCAGAAGGCTCGCCTCTGTAACAAACCACCTCCGTTCCTCTCACACCGCACCCTCCGAGCTGGCCTTGTCCCGCACTTCCACTGCCAACAACAGCTTCAGGCGCGTTCACGGCCAAGTCCCCTCTCACGACGTCATTTGGAGGACCGCTTCCGATGACCACGCCAAGGACTTCACGGACATTGTGTACGAGAAGGCCGTTGGGGAAGGAATAGCCAAGATAAGTATTAATAGGCCAGAGAGAAGGAACGCTTTCCGCCCCCACACGGTGAAGGAGCTCATGCGTGCTTTCACTGACGCCAGGGATGATTCCTCTATTGGAGTCGTCATTTTCACTGGCAAAGGAACCAAGGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGGACTGACGATGGCTATTCTGATGATGGAGATTTTAGTAACCTTAATGTGTTAGACTTGCAGGTGCAAATACGCCGCCTCCCTAAGCCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGGCATATACTACATATGGTCTGTGATCTAACTATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTTGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCTCGTTTGGTAGGTCCAAAAAAAGCGCGTGAAATGTGGTTCCTCACAAGGTTCTATGACGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCACTTGAGAATTTGGAGAAAGAAACGATAAAATGGTGTCGGGAGATACTGAGGAACAGTCCAACAGCTATTCGGGTGATAAAATCAGCTCTTAATGCAGTGGATGATGGACATTCTGGACTTCAGGAACTTGGAGGAAATGCAACACTTATATACTATGGCTCCGAGGAAGCTAAAGAGGGGAAGAATGCATATTTGCAACGTAGGCGCCCTGATTTTTCCAAGTTCAAACGGCGACCTTAA 996 0.4839 MAENKDIETAIRRLASVTNHLRSSHTAPSELALSRTSTANNSFRRVHGQVPSHDVIWRTASDDHAKDFTDIVYEKAVGEGIAKISINRPERRNAFRPHTVKELMRAFTDARDDSSIGVVIFTGKGTKAFCSGGDQALRTDDGYSDDGDFSNLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYDAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVIKSALNAVDDGHSGLQELGGNATLIYYGSEEAKEGKNAYLQRRRPDFSKFKRRP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02572 331 SUPERFAMILY ClpP/crotonase 66 326 IPR029045 -
Spst3g02572 331 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 169 189 IPR018376 GO:0003824
Spst3g02572 331 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 3 331 - -
Spst3g02572 331 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 269 319 - -
Spst3g02572 331 Gene3D - 271 319 IPR014748 -
Spst3g02572 331 CDD crotonase-like 71 267 - -
Spst3g02572 331 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 50 268 - -
Spst3g02572 331 Pfam Enoyl-CoA hydratase/isomerase 79 325 IPR001753 -
Spst3g02572 331 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 68 327 IPR010198 GO:0008935|GO:0009234
Spst3g02572 331 Gene3D - 53 270 - -
Spst3g02572 331 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 57 330 IPR010198 GO:0008935|GO:0009234
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02572 1 331 Acyl Lipid Metabolism Gene Families AT1G60550 74.184 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02572 K01661 - gmx:100807101 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02572 3 73960457 73966216 Spst3g02572 3 73960457 73966216 ECH