Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02568 ATGTCTTTCTTGTTCTCAAAGAAAAGATCAAGAAAATTGGCAATTTTTTCATCTTCGTTGTCTTCAATTGGGTGCCCCTATAAATACTCGCTTCCTACTGTTGTTGTTGTTGTCCACGCTTCTTCTGTTCTGTTCTCATTCTGTGAGAGTGTGTTTGTGCTCAGTTATCACCCACAACTGCTGACTAAGATGGCAGCATCTGCAGATGGCACCCACGATGTTGTGTCCCTCCTCTCTTCACCCCAGAGGGACTTTCTTCTGAGTAACAACGGCGATCAGGTGAAAATTGAGAGCTTGAAGGGAAAGAAACTTGGTGTGTATTTTTCGGCATCCTGGTGTGGTCCGTGTCGAAAATTCACGCCAACTTTGGTGGACGTATACAATGAGTTTGTGTCAAAAGGTGACTTTGAGGTCGTTTTTGCCTCGGCTGATGAAGATGATGACTCTTTTAAAGGTTACTTTTCCAAGATGCCATGGCTTGCAATCCCATTTTCTGATTCGGAGACACGTAGTCGCCTTGATGAATTGTTTCATGTGAAGGGGATACCCCATCTGGTGTTTCTTGATGAAACTGGGAAAGTTGTGACTGAAGATGGAGTTGACGTTGTACGGGAATATGGTGTTCAAGGGTACCCCTTCACATCAGCAAGGATCCAAGAGTTGAGGGATCAAGAAGAGGAAGCTCGGAGGAACCAGTCCGTGATATCTCTCTTGACCTCTCCATCTCGTGACTTTGTTATATCATCCGATGGAAAGAGAATACTTGTCTCTGAGCTTGAGGGCAAGACAGTTGGTCTGTATTTCTGTCTGAAGTTATTTGGGCCAAGCAGTGACTTCACTCCAAAGCTTGTCGACGTTTATCAGAAGCTGAAGGCCATGGGGGAGAACTTTGAGGTTGTGTTGATACCGTTAGATGAAGATGAAGAATCGTTCAAGGAAGTATTAGAAAGTGTGCCTTGGTTATCCTTGCCTTTCAAGGACAAATTCTGCGGGAAGCTGGCTCGGTACTTCGAGCTTTCAACCCTCCCCACTTTGGTTATCATTGGGCCTGATGGGAAAACTCTAAATTCTAATGTTGCTGAGGCTGTTGAGGAACATGGGGTTGCTGCATACCCATTCACTCCTGAAAAGTTTGCTGAGCTTGATGAAATATTGAAGGCCAGGGAGGCAGCTCAAACCCTTGAGTCAATTTTGGTGTCTGAGGATCGTGATTTTGTCATTGGCAAAGATGGGGTGCAGATTCCTGTGTCAGAATTAGAGGGGAAGGTCGTCCTGCTATACTTCTCAGCCCACTGGTGCCCACCATGCCGCGCATTCCTTCCAAAACTTATTGATGCATATCATAAGATTAAGGCAAAGGGCAATGCATTAGAAGTTGTTTTCATCTCAAGTGACAGAGATCAAGCCTCCTTTGATGAATTCTTTGGAGAAATGCCATGGCTGGCACTTCCCTTTGGTGACTCTAGGAAGCAATTCCTGAGTCGCAAATTCAGGGTATCTGGCATCCCCATGCTTGTGGCCATTGGATCAAGTGGCAAGACTTCGACAACTGAGGCTCGAGATCTGGTTTCGCTTTATGGGGCTGATGCATACCCTTTCACTGAGGAGAGAATAAAGGAAATAGAGGCTGAACAAGAAGAAACTGCAAAGGGGTGGCCAGAGAAGGTGACACATGAAACACATGAGCATGAGCTTGTGTTGACACGCCGCAGGGTGTATTACTGCGATGGTTGCAACGAAGAGGGGCACATATGGTCGTATTACTGTCGAGAGTGTGACTTTGATCTGCATCCAAAATGTGTTTTGGAGGAGGACAAAGGAAGCAAAGATGATGGTGATGTTAAGGAAGAAGATAAGTCCAAAGATGGATGGGTTTGTGATGGGGAAGTCTGCAAAAAAGCCTGA 1905 0.4556 MSFLFSKKRSRKLAIFSSSLSSIGCPYKYSLPTVVVVVHASSVLFSFCESVFVLSYHPQLLTKMAASADGTHDVVSLLSSPQRDFLLSNNGDQVKIESLKGKKLGVYFSASWCGPCRKFTPTLVDVYNEFVSKGDFEVVFASADEDDDSFKGYFSKMPWLAIPFSDSETRSRLDELFHVKGIPHLVFLDETGKVVTEDGVDVVREYGVQGYPFTSARIQELRDQEEEARRNQSVISLLTSPSRDFVISSDGKRILVSELEGKTVGLYFCLKLFGPSSDFTPKLVDVYQKLKAMGENFEVVLIPLDEDEESFKEVLESVPWLSLPFKDKFCGKLARYFELSTLPTLVIIGPDGKTLNSNVAEAVEEHGVAAYPFTPEKFAELDEILKAREAAQTLESILVSEDRDFVIGKDGVQIPVSELEGKVVLLYFSAHWCPPCRAFLPKLIDAYHKIKAKGNALEVVFISSDRDQASFDEFFGEMPWLALPFGDSRKQFLSRKFRVSGIPMLVAIGSSGKTSTTEARDLVSLYGADAYPFTEERIKEIEAEQEETAKGWPEKVTHETHEHELVLTRRRVYYCDGCNEEGHIWSYYCRECDFDLHPKCVLEEDKGSKDDGDVKEEDKSKDGWVCDGEVCKKA 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02568 634 ProSiteProfiles Thioredoxin domain profile. 388 543 IPR013766 -
Spst3g02568 634 SUPERFAMILY Thioredoxin-like 407 514 IPR036249 -
Spst3g02568 634 PANTHER THIOREDOXIN 67 367 - -
Spst3g02568 634 SUPERFAMILY Cysteine-rich domain 552 602 IPR046349 -
Spst3g02568 634 ProSiteProfiles Thioredoxin domain profile. 76 227 IPR013766 -
Spst3g02568 634 CDD TryX_like_TryX_NRX 404 533 IPR045870 GO:0004791
Spst3g02568 634 SUPERFAMILY Thioredoxin-like 247 355 IPR036249 -
Spst3g02568 634 Pfam C1 domain 560 601 IPR004146 -
Spst3g02568 634 SUPERFAMILY Thioredoxin-like 86 195 IPR036249 -
Spst3g02568 634 CDD TryX_like_TryX_NRX 84 213 IPR045870 GO:0004791
Spst3g02568 634 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Spst3g02568 634 ProSitePatterns Thioredoxin family active site. 425 443 IPR017937 -
Spst3g02568 634 Pfam Thioredoxin-like 102 194 IPR012336 -
Spst3g02568 634 Pfam Thioredoxin-like 421 513 IPR012336 -
Spst3g02568 634 Pfam Thioredoxin-like 261 353 IPR012336 -
Spst3g02568 634 Gene3D Glutaredoxin 238 374 - -
Spst3g02568 634 Gene3D Glutaredoxin 78 215 - -
Spst3g02568 634 Gene3D Glutaredoxin 396 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02568 Spst-Chr3 73893257 73895721 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02568 K17609 - gmx:100809224 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02568 3 73893257 73895721 Spst3g02568 3 73893257 73895721 ECH