LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g02557	ATGGCCGGAGAATCATACGAGGAAGCCATCGCAGCGTTGACCAAGCTTATCAGCGAGAAAGTAGACCTTGGTGGCGTCGCCGCAGCAAAGATCAAGCAGTTGACGGCGGAGCTGGAGAGCGACGCGTCCAAGCCGTTTAACCCGGACGAGAGGATCCGAACCGGGTTCGCCCACTTCAAGAATGAAAAATTCCAGAAGAATCCAGAATTATACGGTGAACTTGCGAAAGGCCAGAGTCCAAAGTTTCTGGTGTTTGCGTGCTCAGACTCGAGGGTTTGCCCTTCCCATATTCTAGATTTCCAACCGGGAGAAGCCTTTGTGGTCCGAAATATCGCCAACATGGTTCCACCGTATGACAAGACCAAGTATTCAGGAACAGGGGCGGCCATTGAATATGCAGTGCTACATTTGAAGGTGGAGAATATTGTGGTCATTGGACACAGCTGCTGTGGAGGTATAAAGGGCCTCATGTCTATCCCAGATGACGGGACCACTGCAAGTGAATTCATAGAGAATTGGGTCCAAATTTGTAACCCGGCAAGGTCCAAGGAAGCTGTGAATGTATCAGTTGGGAACCTTTTGACTTACCCATTTGTCAGAGATGGTGTTGTGAATAAAACGCTTGCTTTGAAAGGTGCACATTACAATTTCGTTAAGGGTACTTTTGAGCTGTGGGATCTAGACTTCAAAATCTCCAACACTGTGACTGTTTAA	714	0.4804	MAGESYEEAIAALTKLISEKVDLGGVAAAKIKQLTAELESDASKPFNPDERIRTGFAHFKNEKFQKNPELYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIENWVQICNPARSKEAVNVSVGNLLTYPFVRDGVVNKTLALKGAHYNFVKGTFELWDLDFKISNTVTV	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g02557	237	SMART	Pro_CA_2	75	226	IPR001765	GO:0004089\|GO:0008270
	Spst3g02557	237	Pfam	Carbonic anhydrase	83	183	IPR001765	GO:0004089\|GO:0008270
	Spst3g02557	237	SUPERFAMILY	beta-carbonic anhydrase, cab	41	231	IPR036874	GO:0004089\|GO:0008270
	Spst3g02557	237	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	87	94	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Spst3g02557	237	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	131	151	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Spst3g02557	237	Gene3D	Carbonic anhydrase	39	237	IPR036874	GO:0004089\|GO:0008270
	Spst3g02557	237	CDD	beta_CA_cladeB	55	225	IPR045066	GO:0004089\|GO:0008270
	Spst3g02557	237	PANTHER	CARBONIC ANHYDRASE	183	229	IPR001765	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g02557	Spst-Chr3	73804334	73808681	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g02557	K01673		-	gmx:100808326	425.631

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst3g02557	3	73804334	73808681	Spst3g02557	3	73804334	73808681	ECH
	Spst3g02557	3	73804334	73808681	Spst3g02557	3	73804334	73808681	PCT