Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02546 ATGGAGGAGCAACGACAACAACCGCAGGGTCCTCTCCCCATTGACTGGAGCCGACAATTTCAACACGACTCGCCGCCGCGGGAGGTCGTCGTCGTGCCGTCATCCACGGTGGCCTCCGATCAGGACGACCTCAACTCTATTGCCGATCACAAGCTGAAGGAGTCGATTCAGAGCAAGAAGAGAACACTCGACGTTACCGGCAAGAATTTGCCCGACAATGGCGCCAAGCTTCGGGCCACCATCGAACGCTACCAGCAGGAACTTAGTCGCCGGGAACTCATGCGACTTCGCCAGGAAGTTGATGAGGACCAGAAGCAACCCGAACAAGCTACAAGCTCAAGTGCTGTTACCGAGGGGGATCTAATGATATTTTGTGACAGCTCCAACAAAGTAACTTTTGAGACTTATGTATTTGTGTACTATAGTGCAATGACAATGGCGTGGTATTTGAGTTCTGCTATTAATGATTCTATGCAAATCCGCTTTTGGGCAATATGGAACATAAATAGAGTTGTGGTTTTGAGTAATATTGAAAGTGCAGCATGTGGTGGCTGGAGCAGTCTAGCCCTATTTTGTAATTCTGTTCTCAGTAGTTTTCATCCATTCCTCACCTATGCAACCACTTCTAGGCATTCCTTGTTCTTATTCTCTAGCTTCTCTTGCAGTTTAACTTTTGTGTCTACTAATGACTTGAGAGAAGAGAATTCGTCGTCTCAAGTTCAGCCACAATCCTCTTTTACATCTTTGTTCGTTGAAAAGATGCAAGATAACACTAGTTGTACAGCTTCTGATGCATTTAAAAAGGAGATGTCACATTTCAAACATCGTGACAACCAGAAAATACAAGACAATACAGCTTCTGATGCATTTAAAAAAGAGACGTCATATTTCAAACAGTGTGACAACCAGAAAATACCAGACAATGGAGCATCTAGAAGAAGAAAGAGACATCGTTCATCATCAAGACAATTGCAGTTTCGATGTCCTAGTAAACTTTCCAAACATGATTCTTTTAGTGACGGTAAAACCTGTAGAGCAACTTCCACTTTTGCTCTGCGGAATATTGGGAGAAATCTATCAAGATGCTACCCAAAAGTGTCATCACATCATCATCATTTGCTACAGAAAATTACACGCATGATTTCCTCTTCTGCACCCTTTTCTAATGTTGAAGATGGTGGCAGATATGGCTTGAAGGATACTTCTCAGGCAATTCAATTAGATGGCCCAAGGTCCAGGAAGGGTCAGCCCATTGTTCTTGATGTTGATGATGATGACGACGACGATGAAGATGATGACAAAACTCATATTGTAGAGAAAACAGAAAACAGATTTTCTAAATACCTGAAAGAAGCCAAGATCTATTTTCCATCAAGAGATGATCCAGAGTGTGTAGAAATTTGTTACACAGACACAGATTGCCTTGCCCCTGAAGGCTATTTAACATCAACGATTATGAACTTCTACATTCAGAGCGTATTGTCGTATCTTTATCTTACCTTCTACTCAGTTCTGGGTTTGTTACTCATGATATTTCATATATCCAGCCTTCACTGGAGCTTGATCATTATTTGTATCCCAGACAAAGAAGATGAATCGGGGCCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCTAGTAGATCAGTTTTTGATAATATTAAAAGCTATTTGATTGAAGAAAAGAACTATATGGATCGGGAAAATGTGTCTTCGGATGTTTCAATTGCAGACAGAATATGGAAGTGCCTTCCTCGTAGAATTGAATCTCAAATCATTGCGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTATTGTACTTCATTGAACGTTTCATGGAGGAGGCACCCGAGAGGCTGAAAAGGAAAGATTTGGCAATGTTTGGAAAGCGATGGTTCAGACCTGAAGAGGCATCCAATTTGAGATTGAAAATCCGTAAATTGCTTTTAGAAAAATTACAGAATTCAATCCAGGATAATTGTGACTTAGAATCTTCTCCCTCATCATCTGCTGGCCCTTCAACTGACTCAAGGATTCCAGGACGTAACATGCAATCATGA 2073 0.4149 MEEQRQQPQGPLPIDWSRQFQHDSPPREVVVVPSSTVASDQDDLNSIADHKLKESIQSKKRTLDVTGKNLPDNGAKLRATIERYQQELSRRELMRLRQEVDEDQKQPEQATSSSAVTEGDLMIFCDSSNKVTFETYVFVYYSAMTMAWYLSSAINDSMQIRFWAIWNINRVVVLSNIESAACGGWSSLALFCNSVLSSFHPFLTYATTSRHSLFLFSSFSCSLTFVSTNDLREENSSSQVQPQSSFTSLFVEKMQDNTSCTASDAFKKEMSHFKHRDNQKIQDNTASDAFKKETSYFKQCDNQKIPDNGASRRRKRHRSSSRQLQFRCPSKLSKHDSFSDGKTCRATSTFALRNIGRNLSRCYPKVSSHHHHLLQKITRMISSSAPFSNVEDGGRYGLKDTSQAIQLDGPRSRKGQPIVLDVDDDDDDDEDDDKTHIVEKTENRFSKYLKEAKIYFPSRDDPECVEICYTDTDCLAPEGYLTSTIMNFYIQSVLSYLYLTFYSVLGLLLMIFHISSLHWSLIIICIPDKEDESGPIILHLDSLGLHSSRSVFDNIKSYLIEEKNYMDRENVSSDVSIADRIWKCLPRRIESQIIAVPQQKNEYDCGLFVLYFIERFMEEAPERLKRKDLAMFGKRWFRPEEASNLRLKIRKLLLEKLQNSIQDNCDLESSPSSSAGPSTDSRIPGRNMQS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02546 690 MobiDBLite consensus disorder prediction 301 326 - -
Spst3g02546 690 Gene3D Adenoviral Proteinase; Chain A 422 638 - -
Spst3g02546 690 ProSiteProfiles Ubiquitin-like protease family profile. 465 616 IPR003653 GO:0006508|GO:0008234
Spst3g02546 690 Coils Coil 86 106 - -
Spst3g02546 690 MobiDBLite consensus disorder prediction 1 29 - -
Spst3g02546 690 MobiDBLite consensus disorder prediction 402 433 - -
Spst3g02546 690 SUPERFAMILY Cysteine proteinases 440 655 IPR038765 -
Spst3g02546 690 Pfam Ulp1 protease family, C-terminal catalytic domain 508 641 IPR003653 GO:0006508|GO:0008234
Spst3g02546 690 MobiDBLite consensus disorder prediction 664 690 - -
Spst3g02546 690 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 28 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02546 Spst-Chr3 73610025 73631923 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02546 K16287 - gmx:100790705 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02546 3 73610025 73631923 Spst3g02546 3 73610025 73631923 ECH